DRSC/TRiP Functional Genomics Resources

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Protein Alignment Zasp52 and Ldb3

DIOPT Version :9

Sequence 1:NP_001027420.2 Gene:Zasp52 / 36740 FlyBaseID:FBgn0265991 Length:2194 Species:Drosophila melanogaster
Sequence 2:NP_036048.3 Gene:Ldb3 / 24131 MGIID:1344412 Length:723 Species:Mus musculus


Alignment Length:705 Identity:207/705 - (29%)
Similarity:312/705 - (44%) Gaps:100/705 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly  1542 THARNYNELNAS-------------PFPDRTRSPAPGPPPNPLNAIRAPRMKEP--ETKSNILSV 1591
            ||....|::.::             |.|..|.:|   |..:||..|  |..|:|  :|..::.:.
Mouse    61 THLEAQNKIKSASYNLSLTLQKSKRPIPISTTAP---PIQSPLPVI--PHQKDPALDTNGSLATP 120

  Fly  1592 SGGP--RLQTGSITTGQSYQGQLLAHSEQSSQSASQSYNQQPERITEQRVGNLNIQQREQSSQLQ 1654
            |..|  |...|::..|.::           |.|.||:....|.......|..|.....:.||:..
Mouse   121 SPSPEARASPGALEFGDTF-----------SSSFSQTSVCSPLMEASGPVLPLGSPVAKASSEGA 174

  Fly  1655 QQAQSQT----QSQTR---SQVGNTQIERRRKVTEEFERTQSAKT--IEIRTGSQSVSQSKAQSQ 1710
            |.:.|..    .||.|   :.:|....|..|::.:.::.:...|.  ..:..||..|......|.
Mouse   175 QGSVSPKVLPGPSQPRQYNNPIGLYSAETLREMAQMYQMSLRGKASGAGLLGGSLPVKDLAVDSA 239

  Fly  1711 S-ISQAQTQAQSQSQNQSDT-ERRSSYGKTGFVASQAKRLSCMEEEISSLTSQSQAISARASALG 1773
            | :.||..:.||:.::::|. .||||.     :.|::.|:      ::.:|...........||.
Mouse   240 SPVYQAVIKTQSKPEDEADEWARRSSN-----LQSRSFRI------LAQMTGTEYMQDPDEEALR 293

  Fly  1774 EGCFPNLRSP--TFDSKFPLKPAPAESIVPGYATVPAATKMLTAPPPGFLQQQQQQQQRSAFSGY 1836
            ....|...:|  |..:..||.||.|:|        |||...:.|.|   ..........:|.|..
Mouse   294 RSSTPIEHAPVCTSQATSPLLPASAQS--------PAAASPIAASP---TLATAAATHAAAASAA 347

  Fly  1837 QATTSSVQ----QSSFASSSKATTSSLSSSSASASASASVARSSQSLTQASAITTTTNNQATTAY 1897
            ....|.|:    |:|..|.:.|.:.:.|:.::.:...|:.|...:.:|.||...:.......::|
Mouse   348 GPAASPVENPRPQASAYSPAAAASPAPSAHTSYSEGPAAPAPKPRVVTTASIRPSVYQPVPASSY 412

  Fly  1898 RSSNGSITKPN-LASRPSIASITAPGSASAPAPVPSAAPTKATAPFKAPIVPKSVIANAVNAAAP 1961
            ..|.|:...|. ....|:.|...:|.....|:|.|:.:|:.|.|...:|....:...:|..:..|
Mouse   413 SPSPGANYSPTPYTPSPAPAYTPSPAPTYTPSPAPTYSPSPAPAYTPSPAPNYTPTPSAAYSGGP 477

  Fly  1962 PAPAVFPPDLSDLNLNSNVDNSPGAGGKSAGAFGATSAPKRGRGILNKAAGPGV----------- 2015
            ...|..||.::|.:.:...     |.|||.......:.| ||....| ..||.|           
Mouse   478 SESASRPPWVTDDSFSQKF-----APGKSTTTVSKQTLP-RGAPAYN-PTGPQVTPLARGTFQRA 535

  Fly  2016 -------RIPLCNSCNVQIRGPFITALGRIWCPDHFICVNGNCRRPLQDIGFVEEKGDLYCEYCF 2073
                   |.|||..||..|||||:.|:||.|.|:.|.|  ..|:..|.|:.||||:.::|||.|:
Mouse   536 ERFPASSRTPLCGHCNNVIRGPFLVAMGRSWHPEEFNC--AYCKTSLADVCFVEEQNNVYCERCY 598

  Fly  2074 EKYLAPTCSKCAGKIKGDCLNAIGKHFHPECFTCGQCGKIFGNRPFFLEDGNAYCEADWNELFTT 2138
            |::.||.|:||..||.|:.::|:.:.:|..||.|..|.|.|||..|.:|||..|||.|:..||:|
Mouse   599 EQFFAPICAKCNTKIMGEVMHALRQTWHTTCFVCAACKKPFGNSLFHMEDGEPYCEKDYINLFST 663

  Fly  2139 KCFACGFPVEAGDRWVEALNHNYHSQCFNCTFCKQNLEGQSFYNKGGRPFCKNHA 2193
            ||..|.|||||||:::|||.|.:|..||.|..|..|||||.||:|..:|.||.||
Mouse   664 KCHGCDFPVEAGDKFIEALGHTWHDTCFICAVCHVNLEGQPFYSKKDKPLCKKHA 718

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Zasp52NP_001027420.2 PDZ_signaling 6..87 CDD:238492
DUF4749 150..>217 CDD:292558
LIM_ALP_like 282..333 CDD:188746
LIM1_Enigma_like_1 2020..2073 CDD:188839 25/52 (48%)
LIM 2081..2132 CDD:259829 23/50 (46%)
LIM3_Enigma_like_1 2140..2193 CDD:188845 29/52 (56%)
Ldb3NP_036048.3 PDZ_signaling 5..81 CDD:238492 3/19 (16%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 89..134 14/49 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 164..193 7/28 (25%)
DUF4749 191..293 CDD:374237 22/112 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 280..423 33/153 (22%)
PHA03247 <378..528 CDD:223021 36/156 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 436..525 24/95 (25%)
LIM1_ZASP_Cypher 547..598 CDD:188838 25/52 (48%)
LIM2_Enigma_like 606..657 CDD:188748 23/50 (46%)
LIM3_ZASP_Cypher 665..719 CDD:188844 31/54 (57%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 77 1.000 Domainoid score I8820
eggNOG 1 0.900 - - E1_KOG1703
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1013114at2759
OrthoFinder 1 1.000 - - FOG0000055
OrthoInspector 1 1.000 - - otm43291
orthoMCL 1 0.900 - - OOG6_109269
Panther 1 1.100 - - O PTHR24214
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R6207
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
109.810

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