DRSC/TRiP Functional Genomics Resources

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Protein Alignment Zasp52 and Pdlim2

DIOPT Version :9

Sequence 1:NP_001027420.2 Gene:Zasp52 / 36740 FlyBaseID:FBgn0265991 Length:2194 Species:Drosophila melanogaster
Sequence 2:NP_001240665.1 Gene:Pdlim2 / 213019 MGIID:2384850 Length:349 Species:Mus musculus


Alignment Length:369 Identity:92/369 - (24%)
Similarity:154/369 - (41%) Gaps:94/369 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 PWGFRLQGGTDFAQPLLVQKVNAGSLSEQAGLQPGDAVVKINDVDVFNLRHKDAQDIVVRSGNNF 82
            |||||:.||.||..|::|.||.....:|.|.|:|||.:|.||.....|:.|.:||..:.:|.:..
Mouse    12 PWGFRISGGRDFHTPIIVTKVTERGKAEAADLRPGDIIVAINGQSAENMLHAEAQSKIRQSASPL 76

  Fly    83 VITVQRG-----------GS----------TWRPH-----------VTPTGNVPQPNSPYLQTVT 115
            .:.:.|.           ||          :.|.|           .:|....|:|.||:.....
Mouse    77 RLQLDRSQTASPGQTNGEGSLEVLATRFQGSLRTHRDSQSSQRSACFSPVSLSPRPCSPFSTPPP 141

  Fly   116 KTSLAHKQQDSQHIGCGYNN--------AARPFSNGGDGGVKSIVNKQ--YNTPVGIYSDESIAE 170
            .:.:|..::|.  |||.:.:        ||...:..|..     .::|  :::|    ||.::..
Mouse   142 TSPVALSKEDM--IGCSFQSLTHSPGLAAAHHLTYPGHP-----TSQQAGHSSP----SDSAVRV 195

  Fly   171 TLSAQAEVLAGGVLGVNFKKNEKEYQGDRSEVLKFLREEETGQSTPAFGNSHYEHDAPQQLQQPQ 235
            .|.:     .|......|...:.|   :.|||.|.|:|...|::.|...:|.      :.||:  
Mouse   196 LLHS-----PGRPSSPRFSSLDLE---EDSEVFKMLQENRQGRAAPRQSSSF------RLLQE-- 244

  Fly   236 QQYNQHQQHYHQQQQQQQSSTTRHVSAPVNSPKPPSTGGLPTGQ--------NICTECERLITGV 292
                       ..:.:::..|...|.:.::     |...|||.:        :.|.:|...|:..
Mouse   245 -----------ALEAEERGGTPAFVPSSLS-----SQASLPTSRALATPPKLHTCEKCSVNISNQ 293

  Fly   293 FVRIKD-KNLHVECFKCATCGTSLKNQGYYNFNNKLYCDIHAKQ 335
            .|||:: :..|..|:.||.||.:||.:|::...|:|||:.||:|
Mouse   294 AVRIQEGRYRHPGCYTCADCGLNLKMRGHFWVGNELYCEKHARQ 337

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Zasp52NP_001027420.2 PDZ_signaling 6..87 CDD:238492 27/68 (40%)
DUF4749 150..>217 CDD:292558 15/68 (22%)
LIM_ALP_like 282..333 CDD:188746 19/51 (37%)
LIM1_Enigma_like_1 2020..2073 CDD:188839
LIM 2081..2132 CDD:259829
LIM3_Enigma_like_1 2140..2193 CDD:188845
Pdlim2NP_001240665.1 PDZ_signaling 9..80 CDD:238492 27/67 (40%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 74..147 10/72 (14%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 169..212 9/56 (16%)
DUF4749 <198..252 CDD:406377 14/80 (18%)
LIM_Mystique 283..335 CDD:188833 19/51 (37%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167839628
Domainoid 1 1.000 61 1.000 Domainoid score I10388
eggNOG 1 0.900 - - E1_KOG1703
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24214
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.840

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