DRSC/TRiP Functional Genomics Resources

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Protein Alignment Zasp52 and LDB3

DIOPT Version :9

Sequence 1:NP_001027420.2 Gene:Zasp52 / 36740 FlyBaseID:FBgn0265991 Length:2194 Species:Drosophila melanogaster
Sequence 2:NP_001165081.1 Gene:LDB3 / 11155 HGNCID:15710 Length:732 Species:Homo sapiens


Alignment Length:871 Identity:235/871 - (26%)
Similarity:340/871 - (39%) Gaps:219/871 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly  1376 FPPPSPLSHLTKQGKAVQSGLHKADSIPKYQ----RNWTVLPTQSPIRTPEPQELRENVPLAFVD 1436
            |..|..:|.:|...||.||.|.:.|.:....    ...|.|..|:.|::..     .|:.|. :.
Human    23 FNMPLTISRITPGSKAAQSQLSQGDLVVAIDGVNTDTMTHLEAQNKIKSAS-----YNLSLT-LQ 81

  Fly  1437 APKAPVTSDSSTVHRPIAQVAAPTTVVAPSREREKERRPQLSVPIIVEDRSGPVTMAFQPLDELV 1501
            ..|.|:         ||:..|.|.....|....:|:  |.|       |.:|.: :|..|     
Human    82 KSKRPI---------PISTTAPPVQTPLPVIPHQKD--PAL-------DTNGSL-VAPSP----- 122

  Fly  1502 RPDQALTPTRPYTPSL--TNKPAPIVPFYQTEEKLVFEECSATHARNYNELNASPFPDRTRSPAP 1564
            .|:...:|..|.||.|  |..||             |...||             |.....:..|
Human   123 SPEARASPGTPGTPELRPTFSPA-------------FSRPSA-------------FSSLAEASDP 161

  Fly  1565 GPPPNPLNAIRAPRMKEPETKSNILSVSGGPRLQTGSITTGQSYQGQLLAHSEQSSQSASQSYNQ 1629
            |||...|.|     ...||...::|    ||:...|| :..:.|...:..:|.::.:..:|.| |
Human   162 GPPRASLRA-----KTSPEGARDLL----GPKALPGS-SQPRQYNNPIGLYSAETLREMAQMY-Q 215

  Fly  1630 QPERITEQRV---GNLNIQQREQSSQLQQQAQSQTQSQTRSQVGNTQIERRRKVTEEFERTQSAK 1691
            ...|.....|   |..:.|:|...|.|:..|.|                             :.|
Human   216 MSLRGKASGVGLPGGADYQERFNPSALKDSALS-----------------------------THK 251

  Fly  1692 TIEIR--TGSQSVSQSKAQSQSISQAQTQAQSQSQNQSDTERRSSYGKTGFVASQAKRLSCMEEE 1754
            .||::  .|..::..        :|..|.....||:                       :.|:  
Human   252 PIEVKGLGGKATIIH--------AQYNTPISMYSQD-----------------------AIMD-- 283

  Fly  1755 ISSLTSQSQAISARASALGEGCFPNLRSPTFDSKFPLKPAPAESIVPGY-ATVPAATK------- 1811
                     ||:.:|.|.|.         .|....|:|....:|..|.| |.:.:..|       
Human   284 ---------AIAGQAQAQGS---------DFSGSLPIKDLAVDSASPVYQAVIKSQNKPEDEADE 330

  Fly  1812 -------------MLTAPPPG--FLQQQQQQQQRSAFSGYQATTSSVQQSSFASSSKATTSSLSS 1861
                         .:.|...|  |:|...::..|.:    :...||...:..|||:.||.:|.|.
Human   331 WARRSSNLQSRSFRILAQMTGTEFMQDPDEEALRRS----RPQASSYSPAVAASSAPATHTSYSE 391

  Fly  1862 SSASASASASVARSSQSLTQASAITTTTNNQATTAYRSSNGSITKPN-LASRPSIASITAPGSAS 1925
            ..|:.:....|      :|.||...:.......:.|..|.|:...|. ....|:.|...:|..|.
Human   392 GPAAPAPKPRV------VTTASIRPSVYQPVPASTYSPSPGANYSPTPYTPSPAPAYTPSPAPAY 450

  Fly  1926 APAPVPSAAPTKATAPFKAPIVPKSVIANAVNAAAPPAPAVFPPDLSDLNLNSNVDNSPGAGGKS 1990
            .|:|||:..|:.|.|...:|....:...:...:..|..||..||.::|.:.:...     |.|||
Human   451 TPSPVPTYTPSPAPAYTPSPAPNYNPAPSVAYSGGPAEPASRPPWVTDDSFSQKF-----APGKS 510

  Fly  1991 AGAFGATSAPKRGRGILNKAAGPGV------------------RIPLCNSCNVQIRGPFITALGR 2037
            ..:....:.|:.|...  ..|||.|                  |.|||..||..|||||:.|:||
Human   511 TTSISKQTLPRGGPAY--TPAGPQVPPLARGTVQRAERFPASSRTPLCGHCNNVIRGPFLVAMGR 573

  Fly  2038 IWCPDHFICVNGNCRRPLQDIGFVEEKGDLYCEYCFEKYLAPTCSKCAGKIKGDCLNAIGKHFHP 2102
            .|.|:.|.|  ..|:..|.|:.||||:.::|||.|:|::.||.|:||..||.|:.::|:.:.:|.
Human   574 SWHPEEFTC--AYCKTSLADVCFVEEQNNVYCERCYEQFFAPLCAKCNTKIMGEVMHALRQTWHT 636

  Fly  2103 ECFTCGQCGKIFGNRPFFLEDGNAYCEADWNELFTTKCFACGFPVEAGDRWVEALNHNYHSQCFN 2167
            .||.|..|.|.|||..|.:|||..|||.|:..||:|||..|.|||||||:::|||.|.:|..||.
Human   637 TCFVCAACKKPFGNSLFHMEDGEPYCEKDYINLFSTKCHGCDFPVEAGDKFIEALGHTWHDTCFI 701

  Fly  2168 CTFCKQNLEGQSFYNKGGRPFCKNHA 2193
            |..|..|||||.||:|..||.||.||
Human   702 CAVCHVNLEGQPFYSKKDRPLCKKHA 727

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Zasp52NP_001027420.2 PDZ_signaling 6..87 CDD:238492
DUF4749 150..>217 CDD:292558
LIM_ALP_like 282..333 CDD:188746
LIM1_Enigma_like_1 2020..2073 CDD:188839 25/52 (48%)
LIM 2081..2132 CDD:259829 23/50 (46%)
LIM3_Enigma_like_1 2140..2193 CDD:188845 30/52 (58%)
LDB3NP_001165081.1 PDZ_signaling 5..81 CDD:238492 16/63 (25%)
DUF4045 <77..180 CDD:330572 36/158 (23%)
ZM 189..214 CDD:128974 4/25 (16%)
DUF4749 263..353 CDD:318205 20/140 (14%)
Atrophin-1 <387..554 CDD:331285 40/179 (22%)
LIM1_ZASP_Cypher 556..607 CDD:188838 25/52 (48%)
LIM2_Enigma_like 615..666 CDD:188748 23/50 (46%)
LIM3_Enigma_like 674..727 CDD:188749 30/52 (58%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 78 1.000 Domainoid score I8783
eggNOG 1 0.900 - - E1_KOG1703
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1013114at2759
OrthoFinder 1 1.000 - - FOG0000055
OrthoInspector 1 1.000 - - otm41228
orthoMCL 1 0.900 - - OOG6_109269
Panther 1 1.100 - - O PTHR24214
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R6207
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
109.810

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