DRSC/TRiP Functional Genomics Resources

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Protein Alignment Zasp52 and shox2

DIOPT Version :9

Sequence 1:NP_001027420.2 Gene:Zasp52 / 36740 FlyBaseID:FBgn0265991 Length:2194 Species:Drosophila melanogaster
Sequence 2:NP_001093694.1 Gene:shox2 / 100101703 XenbaseID:XB-GENE-480993 Length:311 Species:Xenopus tropicalis


Alignment Length:260 Identity:60/260 - (23%)
Similarity:99/260 - (38%) Gaps:59/260 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly  1632 ERITEQ---RVGNLNIQQREQSSQLQQQA---QSQTQSQTRSQVGNTQIERRRKVTEEFERTQSA 1690
            |||.|.   ::..::.:.:|:..:|:|||   :.||:.:.|....|..:|:..::...|:.|...
 Frog    81 ERIRESGSPKLTEVSPEIKERKEELKQQALEEEGQTKIKQRRSRTNFTLEQLNELERLFDETHYP 145

  Fly  1691 KTIEIRTGSQSVSQSKAQSQSISQAQTQAQSQSQNQ----------SDTE--RRSSYGKTGFVAS 1743
            ........||.:..|:|:.|...|.:.....:.:||          |..|  |.:.|...|    
 Frog   146 DAFMREELSQRLGLSEARVQVWFQNRRAKCRKQENQLHKGVLIGAGSQFEACRVAPYVNVG---- 206

  Fly  1744 QAKRLSCMEE---EISSLTSQSQAISARASALGEGCFPNLRSPTFDSKFPLKPAPAESIVPGYAT 1805
             |.|:...::   .:.||:.|.||.....||:                     |.|...:..:.|
 Frog   207 -ALRMPFQQDSHCNVPSLSFQVQAQLQLDSAV---------------------AHAHHHLHPHLT 249

  Fly  1806 VPAATKMLTAPPPGFLQQQQQQQQRSAFSGYQATTSSVQQSSFASSSKATTSSLSSSSASASASA 1870
            ..|...|..|||.|.        ..:..:...||.:||    .|:::.|.|||.:||.|.....|
 Frog   250 AHAPYMMFPAPPFGL--------PLATLAAETATAASV----VAAAAAAKTSSKNSSIADLRLKA 302

  Fly  1871  1870
             Frog   303  302

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Zasp52NP_001027420.2 PDZ_signaling 6..87 CDD:238492
DUF4749 150..>217 CDD:292558
LIM_ALP_like 282..333 CDD:188746
LIM1_Enigma_like_1 2020..2073 CDD:188839
LIM 2081..2132 CDD:259829
LIM3_Enigma_like_1 2140..2193 CDD:188845
shox2NP_001093694.1 Homeobox 123..177 CDD:365835 10/53 (19%)
OAR 292..307 CDD:367680 4/11 (36%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R6207
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.030

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