DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cep89 and cep89

DIOPT Version :10

Sequence 1:NP_611053.1 Gene:Cep89 / 36733 FlyBaseID:FBgn0266708 Length:476 Species:Drosophila melanogaster
Sequence 2:XP_004913612.2 Gene:cep89 / 100494656 XenbaseID:XB-GENE-1003479 Length:801 Species:Xenopus tropicalis


Alignment Length:561 Identity:132/561 - (23%)
Similarity:223/561 - (39%) Gaps:143/561 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 PDPNQQQHHQNPKKNRKVLQTLSGNFNRRSRSVEVEVKRQDNLGVVHKD--------RKKDRSFN 70
            |.|.:|...:..::|:       |...::.::.|: :|...:| .::||        .::.|:.|
 Frog   210 PPPTKQTSERPLEQNQ-------GRETKQKQNKEI-IKSDGSL-TLNKDPVIPSMNEAEQLRARN 265

  Fly    71 SLLQAKDQQLEQLVQRLATLHRYNDQFAKENDQLRKDSGQ-LERRLTEAEQQVANCSRCQQLGQR 134
            ..|..::|.|...:|.|....:......||....::|..| ::|:.|:||     .:....|.::
 Frog   266 LYLSDENQALSNKLQELKNQIKAMRIKLKEVKNEKRDLSQSIKRQQTDAE-----AAELASLREQ 325

  Fly   135 LDTVLAQNRTLAGDVDMLKTLVFRLNVQIESYQDQRRLGEGAPTCGGSTKVSSSSAPY--PPLP- 196
            ...::.||       |.|||.|:||||::..||.:.|     |.. ...||...|.|.  ||.| 
 Frog   326 AQELVDQN-------DALKTTVYRLNVELSRYQTKFR-----PLL-KDEKVKLGSLPQKGPPPPW 377

  Fly   197 ---THTLGPLLQAYDESLRDKDALLAQYNTEFEHFTGELKRALEENTKLLQSQEQLRRDL--GGW 256
               ...|.|||.||::.:|:||.||..:..|.::|...:|:.:||| |.|.::.|.:||:  ..|
 Frog   378 LLDMKYLSPLLLAYEDRMREKDDLLISFEEEVKNFKTRVKKVVEEN-KQLHNELQGKRDITNAEW 441

  Fly   257 R----------EERVCLQAQLGVCRSKAEAQTRK-----TDLAKEKLVEVMHCYEQRMQTLILDM 306
            :          ||...|..||.|.::||:...|.     |.|.|:.:  |:....|..:..:|:.
 Frog   442 QLIQAQAKLVLEENQTLMEQLQVEQAKAKETERNHLMEVTRLTKQMM--VLEGKNQSREEELLEF 504

  Fly   307 DHLQAAYARTKSELAALKSASSAAPAAVAPPVPAESEALH---------------------QCKA 350
            ...|........||.|......||...||.....:|:..|                     |.|:
 Frog   505 QKQQEVLRSKYDELKANMEGKVAAEEHVAMVNELKSQIQHIQDKSKREEKDLIDKIATLQLQKKS 569

  Fly   351 LL--------------------EQLRQEHARERTCLQEQLQ----------------ATTARAAS 379
            ||                    ::|.::..|:...|::||:                .|.|...|
 Frog   570 LLLERNNLLADNKILDAEGETVKKLNRKLQRKLGHLKQQLEDALEKEVAAHQYLANIITLAENIS 634

  Fly   380 LVR----------STEKAKHSRDRLKARLRMALQWAQKLEAGQAEVRDTY--EAVRRLEVL---V 429
            |.|          .|||.......|:..:|:     :|||    |:...|  :|..:|:.:   :
 Frog   635 LERDELMQVAKSLKTEKHSFFNKMLEGNVRL-----EKLE----ELVKVYKKKAAGKLQDISHRL 690

  Fly   430 QHKESQLRGLHARNAEEMDKLRHKLQQKEETICALLRGKME 470
            ..:|....|...:...||..|:..||.:::|:..:|:.|.:
 Frog   691 SEQEEDFAGKAVQYQREMRHLQRLLQDRQQTLDEVLQQKRQ 731

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cep89NP_611053.1 SMC_prok_B <47..>312 CDD:274008 82/296 (28%)
SMC_prok_B <204..450 CDD:274008 75/334 (22%)
cep89XP_004913612.2 Smc <256..>754 CDD:440809 122/506 (24%)

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