DRSC/TRiP Functional Genomics Resources

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Protein Alignment Impbeta11 and cse1l

DIOPT Version :9

Sequence 1:NP_788357.1 Gene:Impbeta11 / 36732 FlyBaseID:FBgn0284254 Length:1075 Species:Drosophila melanogaster
Sequence 2:NP_958858.1 Gene:cse1l / 30707 ZFINID:ZDB-GENE-990603-1 Length:971 Species:Danio rerio


Alignment Length:1168 Identity:215/1168 - (18%)
Similarity:380/1168 - (32%) Gaps:375/1168 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 SVEQLVAQTLQ---AATNPSHEIVQKAEAQLREWEQQPGFFPTIARLSMRRGGGGDVVSSTEDSE 80
            ::.:.:.:||.   |...|:.:.::..|..    :..|....|:...|              .:|
Zfish    10 TLTEYLQKTLSADPAVRRPAEKFLESVEGN----QNYPILLLTVLEKS--------------QNE 56

  Fly    81 VKVRWMAAVYLKNGVERYWR-----PNSRQELPAEQ--KQQIREVLLRHYDAEEVPQVALQVAVL 138
            | :|..:||..||.::|.||     ||...: |...  |..|..::|...:     |:..|::..
Zfish    57 V-IRVCSAVTFKNYIKRNWRIVEDEPNKISD-PDRTAIKANIVNLMLTSPE-----QIQKQLSDA 114

  Fly   139 LGRLARTDYPRFWPDLLPTLMKQLQSCGTDGDSALQQRILIVLHYVLK----ALASRRLMAEQRA 199
            :..:.|.|:|..|||||..::.:.||    ||..:...:|...|.:.|    ...|..|.:|.: 
Zfish   115 ISIIGREDFPLKWPDLLTEMVNRFQS----GDFHIINGVLRTAHSLFKRYRHEFKSNELWSEIK- 174

  Fly   200 FQELGLQIFGYLAWDIWA-PLTTRFLQLVR--KDEAMALNALQRAYVVMRTLRKLVVYGCAKPYK 261
                       |..|.:| |||..|...:.  :..|..:|||:..:..:..:.||          
Zfish   175 -----------LVLDTFAQPLTELFKATIELCQTHATDINALKVLFSSLTLISKL---------- 218

  Fly   262 STDHMNFVEQLFQRLRQCLELRYELKVGSATPGTATILTELERFVI---KMMKT-------LNEL 316
                  |....||.|.:..|...|           |.:|.....:.   |:::|       |.||
Zfish   219 ------FYSLNFQDLPEFFEDNME-----------TWMTNFHNLLTLDNKLLQTDDEEEAGLLEL 266

  Fly   317 M------------ERHSVSFARFVPVALEFSFHYVFHEGTA---LIFDAGDRINFKNFAIQALNM 366
            :            :::...|..::|       .:|    ||   |:...|..:.:......|:..
Zfish   267 LKSQICDNAALYAQKYDEEFQPYLP-------RFV----TAIWNLLVTTGQEVKYDLLVSNAIQF 320

  Fly   367 LKGIMLSGNDSISAPPEGGAHIEDELLASAAQSQAKFFTAERVTYICEKIVTHYFLLTQQELEEW 431
            |.        |:...|......||:.:               :|.||||::.........:.|.:
Zfish   321 LA--------SVCERPHYKHLFEDQNV---------------LTSICEKVIVPNMEFRSADEEAF 362

  Fly   432 QQDPEGY-DQDDGGGD----------------------------------AWKYALRPSVETLYF 461
            :.:.|.| .:|..|.|                                  ..:||..|.|.    
Zfish   363 EDNSEEYIIRDLEGSDIDTRRRAACDLVRGLCKFFEGPVTGIFSGYVNSMLAEYAKNPGVN---- 423

  Fly   462 TCFTQHSQVMIPEVLRFVRRAQQLQ--LTPES---------------DLKA-------ILLKDAI 502
               .:|....|..|.....:||..:  :|..:               |||:       :|..|||
Zfish   424 ---WKHKDAAIYLVTSLASKAQTQKHGITQANELVNLSEFFLNHILIDLKSPNVNEFPVLKSDAI 485

  Fly   503 -YNAVGQAAFHFFNKLDFGAWLTSQLLAELRVE-ALNFRILRRRIIWLVGHWVGVQLPRELRPLA 565
             |....::.......|.....|.|.|.||..|: ......|.|......|:...:..|.|:.|..
Zfish   486 KYVMTFRSQLPKEQLLQAVPLLVSHLQAESIVQHTYAAHALERLFTMRGGNNTTLITPTEMAPFT 550

  Fly   566 YEACLHLLRPQEDMPTRLAAARTLNLLIDDFEFMPEAFHPYFPSLFEALFLLLHEAGECDTKIVV 630
            .:...||.:... :|........:..::..|..:.||..||.|:|.          |:...|:  
Zfish   551 EQLLNHLFKALA-IPGSSENEYIMKAIMRSFSLLQEAIVPYIPTLI----------GQLTHKL-- 602

  Fly   631 LGTMTLLVEKMSEYIEPQALQFIAYLPLLWRESEEHDLLRCAIIGTLEQLVRTIRDVPEPMKPFL 695
                 |||.|     .|....|..||         .:.|..:|..|.:....|:....|.:.|..
Zfish   603 -----LLVSK-----NPSKPHFNHYL---------FESLCLSIRITCKANPDTVSSFEEALFPVF 648

  Fly   696 YSVIELSTDLQQ-PSHVYLIEDGIMLWLAVIGNSTALTPELLGLCDHLL-PIIEMSSENLRTVLQ 758
            ..:  |..|:|: ..:|:.:   :.|.|.:..||  :....:.|..||| |::...:.|:..:::
Zfish   649 TEI--LQNDVQEFVPYVFQV---MSLLLEIHSNS--IPSSYMALFPHLLQPVLWERTGNIPPLVR 706

  Fly   759 LIHAYILLDAQAYLSRYGEGFVAYCVRSFEDIRVEGIIAMLRIIETCLKTDAALGLRLVRPALPF 823
            |:.||:...|.|..:...:             ::.|::.                          
Zfish   707 LLQAYLEKGAAAIANTASD-------------KIPGLLG-------------------------- 732

  Fly   824 VFQQVCLKQEYPMTMGWYLTIVARTLLIDQSVFMSVVQQLPQADALARI-LDVWIEMFPMVPDTH 887
            |||:: :..:.....|:||             ..|:|:.:| |:|:.:. ..::|.:|..:..:.
Zfish   733 VFQKL-IASKANDHQGFYL-------------LNSIVEHMP-AEAITQYRKQIFILLFQRLQSSK 782

  Fly   888 AEKRKLFCLAFASIF-------GSNELLLARLPHILQLVDETL---------GEV---------- 926
            ..|.....|.|.:::       ...|:.....|.:..:|.|.:         |:|          
Zfish   783 TTKFVKSFLVFINLYSVKYGAIALQEIFDDIQPKMFGMVVEKIVIPEVQKVSGQVEKKICAVGII 847

  Fly   927 ---------MDKQYAATEEGASQATPRFY----DSLVIHDEHELDDLQQQLGSGGGVSEEFHTKG 978
                     ||.:|........||....:    |..:..|||.:|     :....|....|....
Zfish   848 KILTECPAMMDTEYTKLWAPLLQALIGLFELPEDDSIPDDEHFID-----IEDTPGYQTAFSQLA 907

  Fly   979 YPAKTYHDD-----RHRQLVLKDPVYKIPLT------------------EYLKWQLQSLQAQL 1018
            :..|..||.     .:.:::|...::|:...                  ::|:..||:...||
Zfish   908 FAGKKEHDPIGDAVSNPKILLAQSLHKLSTACPGRVPSMLSTSLPTEALQFLQGYLQAATVQL 970

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Impbeta11NP_788357.1 CSE1 23..>768 CDD:227944 168/849 (20%)
IBN_N 42..120 CDD:197981 19/84 (23%)
cse1lNP_958858.1 IBN_N 29..102 CDD:197981 19/92 (21%)
Cse1 156..525 CDD:285678 79/448 (18%)
CAS_CSE1 527..962 CDD:281384 91/532 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5657
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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