DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vha14-1 and Atp6v1f

DIOPT Version :10

Sequence 1:NP_476969.1 Gene:Vha14-1 / 36731 FlyBaseID:FBgn0262512 Length:124 Species:Drosophila melanogaster
Sequence 2:NP_446336.1 Gene:Atp6v1f / 116664 RGDID:621552 Length:119 Species:Rattus norvegicus


Alignment Length:115 Identity:82/115 - (71%)
Similarity:101/115 - (87%) Gaps:0/115 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 KGKLISVIGDEDTCVGFLLGGVGEINKNRHPNFMVVDKNTAVSELEDCFKRFLKRDDIDIILINQ 72
            :||||:|||||||..||||||:||:||||||||:||:|:|.::|:||.|::||.||||.||||||
  Rat     4 RGKLIAVIGDEDTVTGFLLGGIGELNKNRHPNFLVVEKDTTINEIEDTFRQFLNRDDIGIILINQ 68

  Fly    73 NCAELIRHVIDAHTSPVPAVLEIPSKDHPYDASKDSILRRARGMFNPEDL 122
            ..||::||.:|||...:|||||||||:|||||:||||||||:|||..|||
  Rat    69 YIAEMVRHALDAHQRSIPAVLEIPSKEHPYDAAKDSILRRAKGMFTAEDL 118

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vha14-1NP_476969.1 V_ATP_synt_F 5..119 CDD:130171 79/110 (72%)
Atp6v1fNP_446336.1 V_ATP_synt_F 1..115 CDD:130171 79/110 (72%)

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