DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8207 and gmppb

DIOPT Version :9

Sequence 1:NP_611051.2 Gene:CG8207 / 36730 FlyBaseID:FBgn0034035 Length:438 Species:Drosophila melanogaster
Sequence 2:NP_001003491.2 Gene:gmppb / 445097 ZFINID:ZDB-GENE-040801-234 Length:360 Species:Danio rerio


Alignment Length:430 Identity:123/430 - (28%)
Similarity:192/430 - (44%) Gaps:78/430 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 LKAVILIGGPQKGTRFRPLSLDTPKPLFPLAGRPLIAHHIEACAQLPDIREILIIGYYPQTQMEG 66
            :||:||:||  .|||.|||:|..||||.....:|::.|.:||..: ..:|.:::...|....:| 
Zfish     1 MKALILVGG--YGTRLRPLTLTVPKPLVEFCNKPILLHQVEALVK-AGVRHVILAVSYMSELLE- 61

  Fly    67 FVGDMQALYSSSNINIRYLQEFTALGTAGGMYHFRDQIRAGNPRAFFVLNGDVCADFPLQELCDF 131
              .:|:|......|.|....|...|||||.:...| ::...|...|||||.||..|||..::..|
Zfish    62 --REMRAQEQRLGIKISLSHEKEPLGTAGPLALAR-ELLTDNQEPFFVLNSDVICDFPFDDMLKF 123

  Fly   132 HEKRPASALVTIMSTEATRQQSLHYGCLVFDRSSGAVSHYVEKPSSYVSTFINCGVYVCSMDIFT 196
            |::......:.:...|    :...||.:|::..||.:..:||||..:||..||.|:|:.|.    
Zfish   124 HQQHGREGTIVVTKVE----EPSKYGVVVYEGDSGRIHRFVEKPQVFVSNKINAGMYIFSP---- 180

  Fly   197 VLAQIFHSRGQEYSCQAFCNGNGNGNGREQGHIKWEQEVLTPLAGTDKLFAMPVPNWWSQLKTAG 261
              |.:...:.|..|.                    |:|:...:|...:|:||.:..:|..:....
Zfish   181 --AMLRRIQLQPTSI--------------------EKEIFPVMAEEGQLYAMELQGFWMDIGQPK 223

  Fly   262 SAIYANRHYLGLYKKTHPERLANVGIKRGEGDGSLICTVHPDVYVHPSATVHHSAVLGPNVAIGP 326
            ..:.....||...::..||||.       .|.|.|     .:|.|.|:|.:..:..:||||.||.
Zfish   224 DFLTGMCMYLQSVRQQAPERLR-------AGPGFL-----GNVLVDPTAVIGQNCTIGPNVTIGA 276

  Fly   327 GVTIGPGVRIRESIVLEQAQILDHTLVLHSIVGRGSTIGAWARVEGTPSDPDPNKPFAKMENPPL 391
            ||.:..|||::...:|:.|.|..|:.:...|||..|::|.|.|:|                    
Zfish   277 GVVLEDGVRVKRCTILKGAHIRSHSWLESCIVGWSSSVGQWVRME-------------------- 321

  Fly   392 FNNEGKLNPSITILGCFVQVPAEKILLNSIVLPHKELSRS 431
                     ::|:||..|.|..|..:..:.|||||.::.|
Zfish   322 ---------NVTVLGEDVIVNDELYINGANVLPHKSITDS 352

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8207NP_611051.2 GCD1 1..366 CDD:224129 107/363 (29%)
M1P_guanylylT_A_like_N 4..270 CDD:133050 74/265 (28%)
LbetaH 306..372 CDD:294107 25/65 (38%)
gmppbNP_001003491.2 GCD1 1..352 CDD:224129 122/428 (29%)
M1P_guanylylT_B_like_N 1..233 CDD:133047 75/268 (28%)
LbetaH 255..334 CDD:294107 31/107 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1208
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D336231at33208
OrthoFinder 1 1.000 - - FOG0000664
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.820

Return to query results.
Submit another query.