DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8207 and Gmppb

DIOPT Version :9

Sequence 1:NP_611051.2 Gene:CG8207 / 36730 FlyBaseID:FBgn0034035 Length:438 Species:Drosophila melanogaster
Sequence 2:XP_006243873.1 Gene:Gmppb / 363145 RGDID:1560458 Length:393 Species:Rattus norvegicus


Alignment Length:433 Identity:133/433 - (30%)
Similarity:192/433 - (44%) Gaps:84/433 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 LKAVILIGGPQKGTRFRPLSLDTPKPLFPLAGRPLIAHHIEACAQLPDIREILIIGYYPQTQMEG 66
            :||:||:||  .|||.|||:|.|||||.....:|::.|.:||.|.......||.:.|..|...: 
  Rat    34 MKALILVGG--YGTRLRPLTLSTPKPLVDFCNKPILLHQVEALAAAGVDHVILAVSYMSQMLEK- 95

  Fly    67 FVGDMQALYSSSNINIRYLQEFTALGTAGGMYHFRDQI-RAGNPRAFFVLNGDVCADFPLQELCD 130
               :|:|......|.|....|...|||||.:...||.: ...:|  |||||.||..|||.|.:..
  Rat    96 ---EMKAQEQRLGIRISMSHEEEPLGTAGPLALARDLLSETADP--FFVLNSDVICDFPFQAMVQ 155

  Fly   131 FHEK--RPASALVTIMSTEATRQQSLHYGCLVFDRSSGAVSHYVEKPSSYVSTFINCGVYVCSMD 193
            ||..  :..|.|||.:      ::...||.:|.:..:|.:..:||||..:||..||.|:|:.|. 
  Rat   156 FHRHHGQEGSILVTKV------EEPSKYGVVVCEADTGRIHRFVEKPQVFVSNKINAGMYILSP- 213

  Fly   194 IFTVLAQIFHSRGQEYSCQAFCNGNGNGNGREQGHIKWEQEVLTPLAGTDKLFAMPVPNWWSQLK 258
              .||.:|                       :......|:|:...:|...:|:||.:..:|..:.
  Rat   214 --AVLQRI-----------------------QLKPTSIEKEIFPVMAKEGQLYAMELQGFWMDIG 253

  Fly   259 TAGSAIYANRHYLGLYKKTHPERLANVGIKRGEGDGSLICTVHPDVYVHPSATVHHSAVLGPNVA 323
            .....:.....:|...::.|||||.:       |.|     |..:|.|.|||.:..:..:||||:
  Rat   254 QPKDFLTGMCLFLQSLRQKHPERLYS-------GPG-----VVGNVLVDPSARIGQNCSIGPNVS 306

  Fly   324 IGPGVTIGPGVRIRESIVLEQAQILDHTLVLHSIVGRGSTIGAWARVEGTPSDPDPNKPFAKMEN 388
            :||||.:..||.||...||..|.|..|:.:...|||....:|.|.|:|                 
  Rat   307 LGPGVVVEDGVCIRRCTVLRDAHIRSHSWLESCIVGWRCRVGQWVRME----------------- 354

  Fly   389 PPLFNNEGKLNPSITILGCFVQVPAEKILLNSIVLPHKELSRS 431
                        ::|:||..|.|..|..|..:.|||||.:..|
  Rat   355 ------------NVTVLGEDVIVNDELYLNGASVLPHKSIGES 385

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8207NP_611051.2 GCD1 1..366 CDD:224129 116/366 (32%)
M1P_guanylylT_A_like_N 4..270 CDD:133050 81/268 (30%)
LbetaH 306..372 CDD:294107 27/65 (42%)
GmppbXP_006243873.1 GCD1 34..385 CDD:224129 132/431 (31%)
M1P_guanylylT_B_like_N 34..266 CDD:133047 82/271 (30%)
LbetaH 288..367 CDD:294107 33/107 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1208
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D336231at33208
OrthoFinder 1 1.000 - - FOG0000664
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.820

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