DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdk5 and cdk5

DIOPT Version :9

Sequence 1:NP_477080.1 Gene:Cdk5 / 36727 FlyBaseID:FBgn0013762 Length:294 Species:Drosophila melanogaster
Sequence 2:NP_001072776.1 Gene:cdk5 / 780236 XenbaseID:XB-GENE-1010261 Length:292 Species:Xenopus tropicalis


Alignment Length:288 Identity:226/288 - (78%)
Similarity:253/288 - (87%) Gaps:0/288 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MQKYDKMEKIGEGTYGTVFKGRNRDTMEIVALKRVRLDEDDEGVPSSALREICLLKELKHKNIVR 65
            ||||:|:|||||||||||||.:||:|.|||||||||||:||||||||||||||||||||||||||
 Frog     1 MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVR 65

  Fly    66 LIDVLHSDKKLTLVFEHCDQDLKKYFDSLNGEIDMAVCRSFMLQLLRGLAFCHSHNVLHRDLKPQ 130
            |.||||||||||||||:|||||||||||.||::|..:.:|||.|||:||.||||.||||||||||
 Frog    66 LHDVLHSDKKLTLVFEYCDQDLKKYFDSCNGDLDPEIVKSFMYQLLKGLGFCHSRNVLHRDLKPQ 130

  Fly   131 NLLINKNGELKLADFGLARAFGIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCILAEL 195
            |||||:|||||||||||||||||||:|||||||||||||||||||||||:|||||||||||.|||
 Frog   131 NLLINRNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAEL 195

  Fly   196 ADAGRPLFPGSDVLDQLMKIFRVLGTPNEDSWPGVSHLSDYVALPSFPAITSWSQLVPRLNSKGR 260
            |:||||||||:||.|||.:|||:||||.|:.||.::.|.||...|.:||..|...:||:||:.||
 Frog   196 ANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPAMTKLPDYKPYPMYPATMSLVNVVPKLNATGR 260

  Fly   261 DLLQKLLICRPNQRISAEAAMQHPYFTD 288
            ||||.||.|.|.|||.|:.|:|||||.|
 Frog   261 DLLQNLLKCNPVQRICADEALQHPYFAD 288

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdk5NP_477080.1 PLN00009 1..288 CDD:177649 225/286 (79%)
STKc_CDK5 3..286 CDD:143344 221/282 (78%)
cdk5NP_001072776.1 STKc_CDK5 3..286 CDD:143344 221/282 (78%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H3623
Inparanoid 1 1.050 363 1.000 Inparanoid score I2134
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1010560at2759
OrthoFinder 1 1.000 - - FOG0000411
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X3829
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
55.060

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