DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdk5 and cdk16

DIOPT Version :9

Sequence 1:NP_477080.1 Gene:Cdk5 / 36727 FlyBaseID:FBgn0013762 Length:294 Species:Drosophila melanogaster
Sequence 2:XP_021334043.1 Gene:cdk16 / 559750 ZFINID:ZDB-GENE-030131-2939 Length:537 Species:Danio rerio


Alignment Length:288 Identity:159/288 - (55%)
Similarity:208/288 - (72%) Gaps:5/288 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MQKYDKMEKIGEGTYGTVFKGRNRDTMEIVALKRVRLDEDDEGVPSSALREICLLKELKHKNIVR 65
            ::.|.|::|:|||||.||:|||::.|..:||||.:|| |.:||.|.:|:||:.|||:|||.|||.
Zfish   190 LETYVKLDKLGEGTYATVYKGRSKLTDNLVALKEIRL-EHEEGAPCTAIREVSLLKDLKHANIVT 253

  Fly    66 LIDVLHSDKKLTLVFEHCDQDLKKYFDSLNGEIDMAVCRSFMLQLLRGLAFCHSHNVLHRDLKPQ 130
            |.|::|:.|.||||||:.|:|||:|.|.....|.|...:.|:.||||||.:||...|||||||||
Zfish   254 LHDIIHTQKSLTLVFEYLDKDLKQYLDDCGNSIHMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQ 318

  Fly   131 NLLINKNGELKLADFGLARAFGIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCILAEL 195
            |||||..|||||||||||||..||.|.||.|||||||||||:|.|:..|:|.||||..|||..|:
Zfish   319 NLLINDRGELKLADFGLARAKSIPTKTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEM 383

  Fly   196 ADAGRPLFPGSDVLDQLMKIFRVLGTPNEDSWPGVSHLSDYVA--LPSFPAITSWSQLVPRLNSK 258
            : .||||||||.|.::|..||::||||.|::|||::...::::  .|.:.|....:. .|||::.
Zfish   384 S-TGRPLFPGSTVEEELHFIFKLLGTPTEETWPGITSNEEFISYNYPRYRADCLHNH-TPRLDND 446

  Fly   259 GRDLLQKLLICRPNQRISAEAAMQHPYF 286
            |.:||.|||.....:||:||.||:||||
Zfish   447 GVELLSKLLQFEGKKRIAAEEAMRHPYF 474

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdk5NP_477080.1 PLN00009 1..288 CDD:177649 159/288 (55%)
STKc_CDK5 3..286 CDD:143344 157/284 (55%)
cdk16XP_021334043.1 STKc_PCTAIRE1 190..486 CDD:270854 159/288 (55%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1010560at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

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