DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdk5 and cdk18

DIOPT Version :9

Sequence 1:NP_477080.1 Gene:Cdk5 / 36727 FlyBaseID:FBgn0013762 Length:294 Species:Drosophila melanogaster
Sequence 2:NP_001006837.1 Gene:cdk18 / 448581 XenbaseID:XB-GENE-489094 Length:462 Species:Xenopus tropicalis


Alignment Length:288 Identity:158/288 - (54%)
Similarity:204/288 - (70%) Gaps:5/288 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MQKYDKMEKIGEGTYGTVFKGRNRDTMEIVALKRVRLDEDDEGVPSSALREICLLKELKHKNIVR 65
            ::.|.|::|:|||||.||||||::.|..:||||.:|| |.:||.|.:|:||:.|||.|||.|||.
 Frog   129 LETYIKLDKLGEGTYATVFKGRSKLTGNLVALKEIRL-EHEEGAPCTAIREVSLLKNLKHSNIVT 192

  Fly    66 LIDVLHSDKKLTLVFEHCDQDLKKYFDSLNGEIDMAVCRSFMLQLLRGLAFCHSHNVLHRDLKPQ 130
            |.|::|::..||||||:.|.|||:|.|:....:.|...:.||.||||||::||...:||||||||
 Frog   193 LHDIIHTEYCLTLVFEYLDSDLKQYLDNCGNLMCMHNVKIFMFQLLRGLSYCHRRKILHRDLKPQ 257

  Fly   131 NLLINKNGELKLADFGLARAFGIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCILAEL 195
            |||||:.|||||||||||||..:|.|.||.|||||||||||||.|:..|:|.||||..||||.|:
 Frog   258 NLLINEKGELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEM 322

  Fly   196 ADAGRPLFPGSDVLDQLMKIFRVLGTPNEDSWPGVSHLSDYVALPSFPAITS--WSQLVPRLNSK 258
            | .|||:||||.|.::|..|||:||||.|::|||:....::... .||...:  .....|||:|.
 Frog   323 A-TGRPMFPGSTVKEELHLIFRLLGTPTEETWPGICSNKEFKGY-GFPQYRTQPLKNHTPRLDSD 385

  Fly   259 GRDLLQKLLICRPNQRISAEAAMQHPYF 286
            |.|||..||:....:||||:..::|.||
 Frog   386 GIDLLSSLLLYEDKKRISADMGLRHAYF 413

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdk5NP_477080.1 PLN00009 1..288 CDD:177649 158/288 (55%)
STKc_CDK5 3..286 CDD:143344 156/284 (55%)
cdk18NP_001006837.1 STKc_PCTAIRE3 126..413 CDD:270853 156/286 (55%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1010560at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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