DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdk5 and Pitslre

DIOPT Version :9

Sequence 1:NP_477080.1 Gene:Cdk5 / 36727 FlyBaseID:FBgn0013762 Length:294 Species:Drosophila melanogaster
Sequence 2:NP_649251.2 Gene:Pitslre / 40292 FlyBaseID:FBgn0016696 Length:952 Species:Drosophila melanogaster


Alignment Length:311 Identity:123/311 - (39%)
Similarity:186/311 - (59%) Gaps:35/311 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MQKYDKMEKIGEGTYGTVFKGRNRDTMEIVALKRVRLDEDDEGVPSSALREICLLKELKHKNIVR 65
            ::::..:.:|.|||||.|::.:::.|.|||||||::::::.||.|.::||||..|.:.:|.|||.
  Fly   555 VEEFQCLNRIEEGTYGVVYRAKDKRTNEIVALKRLKMEKEKEGFPITSLREINTLLKGQHPNIVT 619

  Fly    66 LIDVLHSDK--KLTLVFEHCDQDLKKYFDSLN--------GEIDMAVCRSFMLQLLRGLAFCHSH 120
            :.:::....  |:.:|.::.:.|||...:::.        ||:     :....||||.:|..|.:
  Fly   620 VREIVVGSNMDKIFIVMDYVEHDLKSLMETMKNRKQSFFPGEV-----KCLTQQLLRAVAHLHDN 679

  Fly   121 NVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDM 185
            .:||||||..|||::..|.||:.||||||.:|.|:|.|::.|||||||.|::|..:.:|:|.||:
  Fly   680 WILHRDLKTSNLLLSHKGILKVGDFGLAREYGSPIKKYTSLVVTLWYRAPELLLCSPVYSTPIDV 744

  Fly   186 WSAGCILAELADAGRPLFPGSDVLDQLMKIFRVLGTPNEDSWPGVSHLSDYVALPSFPAITSW-- 248
            ||.|||.||.... .|||||...:|:|.:||:.||||||..|||      |..||:...:.|.  
  Fly   745 WSVGCIFAEFLQM-LPLFPGKSEIDELNRIFKELGTPNEKIWPG------YTELPAVKNMLSQNS 802

  Fly   249 -------SQLVPRLNSK----GRDLLQKLLICRPNQRISAEAAMQHPYFTD 288
                   |||......|    |..|||.||...|.||:||:||::|.:|.:
  Fly   803 QFTEYPVSQLRKHFQEKTSEMGLSLLQGLLTYDPKQRLSADAALKHGFFKE 853

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdk5NP_477080.1 PLN00009 1..288 CDD:177649 123/309 (40%)
STKc_CDK5 3..286 CDD:143344 122/305 (40%)
PitslreNP_649251.2 STKc_CDC2L1 552..851 CDD:173741 122/307 (40%)
PLN00009 555..854 CDD:177649 123/311 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45442405
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24056
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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