DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdk5 and CG7236

DIOPT Version :9

Sequence 1:NP_477080.1 Gene:Cdk5 / 36727 FlyBaseID:FBgn0013762 Length:294 Species:Drosophila melanogaster
Sequence 2:NP_608950.3 Gene:CG7236 / 33798 FlyBaseID:FBgn0031730 Length:438 Species:Drosophila melanogaster


Alignment Length:297 Identity:113/297 - (38%)
Similarity:164/297 - (55%) Gaps:15/297 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MQKYDKMEKIGEGTYGTVFKGRNRDTMEIVALKRVRLDEDDEGVPSSALREICLLKELKHKNIVR 65
            |.:|:|:.::|||:||.|:|.|:|:|..:||:||....|||..:...|||||.|||.|||.|:|.
  Fly    47 MDRYEKLSRLGEGSYGVVYKCRDRETGALVAVKRFVESEDDPAIRKIALREIRLLKNLKHPNLVS 111

  Fly    66 LIDVLHSDKKLTLVFEHCD----QDLKKYFDSLNGEIDMAVCRSFMLQLLRGLAFCHSHNVLHRD 126
            |::|....::|.||||.|:    .:|:::.......:...:|    .|.|.|:|:||....||||
  Fly   112 LLEVFRRKRRLHLVFEFCELTVLHELERHPQGCPEHLTKQIC----YQTLLGVAYCHKQGCLHRD 172

  Fly   127 LKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCI 191
            :||:|:|:...|::||.|||.||... |.:.|:..|.|.|||.|::|.|...|.|.:|:|:.||:
  Fly   173 IKPENILLTAQGQVKLCDFGFARMLS-PGENYTDYVATRWYRAPELLVGDTQYGTPVDVWAIGCL 236

  Fly   192 LAELADAGRPLFPGSDVLDQLMKIFRVLG--TPNEDSWPGVSHLSDYVALPSFPAITSWSQLVP- 253
            .|||. .|..|:||...:|||..|.:.||  .|......|.:.....:.||..|.:......:| 
  Fly   237 FAELV-RGEALWPGRSDVDQLYLIRKTLGDLLPRHIQIFGQNEYFKGITLPVPPTLEPLEDKMPA 300

  Fly   254 --RLNSKGRDLLQKLLICRPNQRISAEAAMQHPYFTD 288
              :.|....|.|:|.|...|.:|.|.|...:|.||.|
  Fly   301 KSQQNPLTIDFLKKCLDKDPTKRWSCEKLTKHSYFDD 337

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdk5NP_477080.1 PLN00009 1..288 CDD:177649 112/295 (38%)
STKc_CDK5 3..286 CDD:143344 109/291 (37%)
CG7236NP_608950.3 STKc_CDKL1_4 48..335 CDD:270837 109/292 (37%)
Pkinase 50..335 CDD:278497 109/290 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45442471
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24056
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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