DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdk5 and Cdk18

DIOPT Version :10

Sequence 1:NP_477080.1 Gene:Cdk5 / 36727 FlyBaseID:FBgn0013762 Length:294 Species:Drosophila melanogaster
Sequence 2:NP_032821.1 Gene:Cdk18 / 18557 MGIID:97518 Length:451 Species:Mus musculus


Alignment Length:296 Identity:167/296 - (56%)
Similarity:214/296 - (72%) Gaps:5/296 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MQKYDKMEKIGEGTYGTVFKGRNRDTMEIVALKRVRLDEDDEGVPSSALREICLLKELKHKNIVR 65
            ::.|.|::|:|||||.||||||::.|..:||||.:|| |.:||.|.:|:||:.|||:|||.|||.
Mouse   118 LETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRL-EHEEGAPCTAIREVSLLKDLKHANIVT 181

  Fly    66 LIDVLHSDKKLTLVFEHCDQDLKKYFDSLNGEIDMAVCRSFMLQLLRGLAFCHSHNVLHRDLKPQ 130
            |.|::|:|:.||||||:.|.|||:|.|.....::|...:.||.|||||||:||...:||||||||
Mouse   182 LHDLIHTDRSLTLVFEYLDSDLKQYLDHCGNLMNMHNVKIFMFQLLRGLAYCHHRKILHRDLKPQ 246

  Fly   131 NLLINKNGELKLADFGLARAFGIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCILAEL 195
            |||||:.|||||||||||||..:|.|.||.|||||||||||||.|:..|:|.||||..||||.|:
Mouse   247 NLLINERGELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEM 311

  Fly   196 ADAGRPLFPGSDVLDQLMKIFRVLGTPNEDSWPGVSHLSDYVALPSFPAITSWSQL--VPRLNSK 258
            | .|:||||||.|.::|..|||:||||.|:|||||:.:|::.|. :||.......|  .|||:::
Mouse   312 A-TGKPLFPGSTVKEELHLIFRLLGTPTEESWPGVTSISEFRAY-NFPRYLPQPLLSHAPRLDTE 374

  Fly   259 GRDLLQKLLICRPNQRISAEAAMQHPYFTDSSSSGH 294
            |.:||..||:.....|:|||||:.||||.......|
Mouse   375 GINLLSSLLLYESKSRMSAEAALNHPYFQSLGDRVH 410

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdk5NP_477080.1 STKc_CDK5 3..286 CDD:143344 164/284 (58%)
Cdk18NP_032821.1 Protein Kinases, catalytic domain 115..402 CDD:473864 164/286 (57%)

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