DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdk5 and T07F12.4

DIOPT Version :9

Sequence 1:NP_477080.1 Gene:Cdk5 / 36727 FlyBaseID:FBgn0013762 Length:294 Species:Drosophila melanogaster
Sequence 2:NP_001368727.1 Gene:T07F12.4 / 180763 WormBaseID:WBGene00020324 Length:329 Species:Caenorhabditis elegans


Alignment Length:299 Identity:81/299 - (27%)
Similarity:130/299 - (43%) Gaps:63/299 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 QKYDKMEK----IGEGTYGTVFKGRNRDTMEIVALKR---VRLDEDDEGVPSSALREICLLKELK 59
            :||:.|:.    ||.|.:|.||||..:|:...:|:||   |.:.|.          |:.::|||.
 Worm    54 EKYEYMDSVDAMIGMGAFGAVFKGSLKDSSNSIAIKRMLKVHVKES----------ELKMIKELN 108

  Fly    60 HKNIVRLIDVLHSDKKL-TLVFEHCDQDLKKYFD--SLNGEIDMAVCRSFMLQLLRGLAFCHSHN 121
            .:.:|.::|:.:.|... .|:.|.||.||..:..  |:.|.::.:..|..:..:.||....:...
 Worm   109 SEYLVGVLDICNFDDFFCCLIMELCDCDLDHHMRNISVKGRLNPSNFRLLLDNIARGYKALYELK 173

  Fly   122 VLHRDLKPQNLLINKNGELK------LADFGLARAFGIPVKCYSAEVVTLWYRPPDVLFGAKL-- 178
            ::|||:||||:||......|      :.|||::|......:.......|.:|..|:|  ||.|  
 Worm   174 IVHRDIKPQNILITYTDASKQIACARITDFGISRTLDNEGEELCNVAGTFYYMAPEV--GANLLK 236

  Fly   179 ---YTTSIDMWSAGCILAELADAGRPLFPGSDVLDQLMKIFRVLGTPNEDSWPGVSHLSDYVALP 240
               |.:.:||||.||:|.:......|....|     |.|:|..:...|.|::       |...||
 Worm   237 TCQYDSKVDMWSIGCLLYQCVTGEVPFDECS-----LCKLFLYVAGANFDAY-------DPPELP 289

  Fly   241 SFPAITSWSQLVPRLNSKGRDLLQKLL------ICRPNQ 273
            .            .|:.:...::|.||      .|.|.|
 Worm   290 D------------ELSQEVSGIIQSLLQLDTTQRCTPTQ 316

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdk5NP_477080.1 PLN00009 1..288 CDD:177649 81/299 (27%)
STKc_CDK5 3..286 CDD:143344 81/298 (27%)
T07F12.4NP_001368727.1 S_TKc 66..316 CDD:214567 77/285 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
21.960

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