DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdk5 and cdk-2

DIOPT Version :9

Sequence 1:NP_477080.1 Gene:Cdk5 / 36727 FlyBaseID:FBgn0013762 Length:294 Species:Drosophila melanogaster
Sequence 2:NP_001021537.2 Gene:cdk-2 / 171911 WormBaseID:WBGene00019362 Length:338 Species:Caenorhabditis elegans


Alignment Length:289 Identity:134/289 - (46%)
Similarity:195/289 - (67%) Gaps:7/289 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 KYDKMEKIGEGTYGTVFKGRN-RDTMEIVALKRVRLDEDDEGVPSSALREICLLKELKHKNIVRL 66
            ::..:.:|||||||.|||..: ||.:: .|||.:|.|.|:||:||:.||||..:|:|:|.|||.|
 Worm    14 RFCSLRRIGEGTYGVVFKAIHVRDNVK-CALKMIRTDRDEEGIPSTCLREISCIKDLQHDNIVTL 77

  Fly    67 IDVLHSDKKLTLVFEHCDQDLKKYFDSL---NGEIDMAVCRSFMLQLLRGLAFCHSHNVLHRDLK 128
            .|:::::.||.:|||..|:|||...:.|   |..:.....:|||.|||..|::||...::|||||
 Worm    78 FDIIYANSKLYMVFEFIDRDLKNLLEMLEPTNSVLPPNYVKSFMWQLLSALSYCHLRRIVHRDLK 142

  Fly   129 PQNLLINKNGELKLADFGLARAFGIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCILA 193
            |||:|::.:|.:|:|||||||.|..|.:.|:.||||||||||::|.|::.|:||:||||.|||.:
 Worm   143 PQNILVSDSGVIKIADFGLARNFSFPSRNYTHEVVTLWYRPPEILLGSQRYSTSLDMWSLGCIFS 207

  Fly   194 ELADAGRPLFPGSDVLDQLMKIFRVLGTPNEDSWPGVSHLSDYVAL-PSFPAITSWSQLVPRLNS 257
            |:| :.:|||||...:.||.|||.::||||..|||||.....|.|: |.:|......:....|..
 Worm   208 EIA-SNKPLFPGECEISQLFKIFEIVGTPNIKSWPGVDSFPHYKAVFPQWPVNLKKLEETSCLTG 271

  Fly   258 KGRDLLQKLLICRPNQRISAEAAMQHPYF 286
            .|.|:|:::|...|.:|::|:.|:.|.||
 Worm   272 NGLDVLREILRYPPERRLTAKGALSHRYF 300

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdk5NP_477080.1 PLN00009 1..288 CDD:177649 134/289 (46%)
STKc_CDK5 3..286 CDD:143344 132/287 (46%)
cdk-2NP_001021537.2 STKc_CDK_like 15..300 CDD:270823 132/286 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160165771
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1010560at2759
OrthoFinder 1 1.000 - - FOG0000411
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.850

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