DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdk5 and Cdk5

DIOPT Version :9

Sequence 1:NP_477080.1 Gene:Cdk5 / 36727 FlyBaseID:FBgn0013762 Length:294 Species:Drosophila melanogaster
Sequence 2:NP_031694.1 Gene:Cdk5 / 12568 MGIID:101765 Length:292 Species:Mus musculus


Alignment Length:288 Identity:228/288 - (79%)
Similarity:255/288 - (88%) Gaps:0/288 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MQKYDKMEKIGEGTYGTVFKGRNRDTMEIVALKRVRLDEDDEGVPSSALREICLLKELKHKNIVR 65
            ||||:|:|||||||||||||.:||:|.|||||||||||:||||||||||||||||||||||||||
Mouse     1 MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVR 65

  Fly    66 LIDVLHSDKKLTLVFEHCDQDLKKYFDSLNGEIDMAVCRSFMLQLLRGLAFCHSHNVLHRDLKPQ 130
            |.||||||||||||||.|||||||||||.||::|..:.:||:.|||:||.||||.||||||||||
Mouse    66 LHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQ 130

  Fly   131 NLLINKNGELKLADFGLARAFGIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCILAEL 195
            |||||:|||||||||||||||||||:|||||||||||||||||||||||:|||||||||||.|||
Mouse   131 NLLINRNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAEL 195

  Fly   196 ADAGRPLFPGSDVLDQLMKIFRVLGTPNEDSWPGVSHLSDYVALPSFPAITSWSQLVPRLNSKGR 260
            |:||||||||:||.|||.:|||:||||.|:.||.::.|.||...|.:||.||...:||:||:.||
Mouse   196 ANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPAMTKLPDYKPYPMYPATTSLVNVVPKLNATGR 260

  Fly   261 DLLQKLLICRPNQRISAEAAMQHPYFTD 288
            ||||.||.|.|.||||||.|:|||||:|
Mouse   261 DLLQNLLKCNPVQRISAEEALQHPYFSD 288

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdk5NP_477080.1 PLN00009 1..288 CDD:177649 227/286 (79%)
STKc_CDK5 3..286 CDD:143344 223/282 (79%)
Cdk5NP_031694.1 STKc_CDK5 3..286 CDD:143344 223/282 (79%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167848249
Domainoid 1 1.000 467 1.000 Domainoid score I462
eggNOG 1 0.900 - - E1_KOG0662
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H3623
Inparanoid 1 1.050 474 1.000 Inparanoid score I1481
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1010560at2759
OrthoFinder 1 1.000 - - FOG0000411
OrthoInspector 1 1.000 - - oto95048
orthoMCL 1 0.900 - - OOG6_100334
Panther 1 1.100 - - LDO PTHR24056
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R185
SonicParanoid 1 1.000 - - X3829
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1514.790

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