DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cdk5 and cdk14

DIOPT Version :9

Sequence 1:NP_477080.1 Gene:Cdk5 / 36727 FlyBaseID:FBgn0013762 Length:294 Species:Drosophila melanogaster
Sequence 2:XP_012819652.1 Gene:cdk14 / 100125075 XenbaseID:XB-GENE-943250 Length:469 Species:Xenopus tropicalis


Alignment Length:292 Identity:148/292 - (50%)
Similarity:196/292 - (67%) Gaps:12/292 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 YDKMEKIGEGTYGTVFKGRNRDTMEIVALKRVRLDEDDEGVPSSALREICLLKELKHKNIVRLID 68
            |:|:||:|||:|.||:||:::...::||||.:||.| :||.|.:|:||..|||.|||.|||.|.|
 Frog   135 YEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQE-EEGTPFTAIREASLLKGLKHANIVLLHD 198

  Fly    69 VLHSDKKLTLVFEHCDQDLKKYFDSLNGEIDMAVCRSFMLQLLRGLAFCHSHNVLHRDLKPQNLL 133
            ::|:.:.||||||:...||.:|.|...|.::....:.|:.||||||::.|..::|||||||||||
 Frog   199 IIHTKETLTLVFEYVHTDLCQYMDKHPGGLNPENVKLFLFQLLRGLSYIHQGHILHRDLKPQNLL 263

  Fly   134 INKNGELKLADFGLARAFGIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCILAELADA 198
            |:..|||||||||||||..:|...||.|||||||||||||.|:..|:|.:|||..|||..|:.. 
 Frog   264 ISDTGELKLADFGLARAKSVPSHTYSNEVVTLWYRPPDVLLGSTDYSTCLDMWGVGCIFVEMIQ- 327

  Fly   199 GRPLFPG-SDVLDQLMKIFRVLGTPNEDSWPGVSHLSDYVALPSFPAI------TSWSQLVPRLN 256
            |...||| .|:.|||.:||.:||||||::|||| |...:..|..|...      .:|::|  ...
 Frog   328 GVAAFPGMKDIQDQLERIFLILGTPNEETWPGV-HSLPHFKLERFTQYGPKNLRQAWNKL--SYV 389

  Fly   257 SKGRDLLQKLLICRPNQRISAEAAMQHPYFTD 288
            :...||..|||.|.|..|:||:||:.|.||:|
 Frog   390 NHAEDLASKLLQCFPKNRLSAQAALNHDYFSD 421

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdk5NP_477080.1 PLN00009 1..288 CDD:177649 147/290 (51%)
STKc_CDK5 3..286 CDD:143344 145/288 (50%)
cdk14XP_012819652.1 STKc_PFTAIRE1 129..431 CDD:143374 148/292 (51%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1010560at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

Return to query results.
Submit another query.