DRSC/TRiP Functional Genomics Resources

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Protein Alignment eIF2Bgamma and GCD6

DIOPT Version :10

Sequence 1:NP_611046.2 Gene:eIF2Bgamma / 36722 FlyBaseID:FBgn0034029 Length:455 Species:Drosophila melanogaster
Sequence 2:NP_010497.3 Gene:GCD6 / 851797 SGDID:S000002619 Length:712 Species:Saccharomyces cerevisiae


Alignment Length:492 Identity:106/492 - (21%)
Similarity:182/492 - (36%) Gaps:121/492 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 QAVVFAAGRGTRLPEVLGDAPKCLLPVGPYPLIWYPLNLLQQHNFTEVIVVVLEQEKLEIQSALE 69
            ||||......||...:....|:||||:...|||.|.|..|.:....||.::...... :|...:|
Yeast    28 QAVVLTDSYETRFMPLTAVKPRCLLPLANVPLIEYTLEFLAKAGVHEVFLICSSHAN-QINDYIE 91

  Fly    70 N-------TPLKLRLDYATIPSDGDFGTADSLRYIYDK--IKSDFLVVSCDLVSNVSLYPLIN-- 123
            |       :|.|:    .||.|.....|.|.:|.:.::  |..||::||.|:::|:....::.  
Yeast    92 NSKWNLPWSPFKI----TTIMSPEARCTGDVMRDLDNRGIITGDFILVSGDVLTNIDFSKMLEFH 152

  Fly   124 -----KFREHDAALAM----------LLFPSGFESDVV---------MPGPKSKHKPERDLIGIH 164
                 :.::|.:.:.:          .:.|:.|..|..         :|.|.|:.|         
Yeast   153 KKMHLQDKDHISTMCLSKASTYPKTRTIEPAAFVLDKSTSRCIYYQDLPLPSSREK--------- 208

  Fly   165 AATQRLAFVSAASDCEETLNIQRHLLKNRGRLDVYSRLVDAHVYVLKKWVIDYLRRKENI----- 224
                    .|...|.|...|:...:::| ..:|....:..:||.::.:...||...:.:.     
Yeast   209 --------TSIQIDPELLDNVDEFVIRN-DLIDCRIDICTSHVPLIFQENFDYQSLRTDFVKGVI 264

  Fly   225 -STFKGEFLPHLIKKQHSKRPPK-TVQDTTSEVGVVTKNEDHVLHYVGHTILDQKITQTSLFNQS 287
             |...|:.:...:..:::.|... ...||.|        :|.:..:....:||..|..    :|:
Yeast   265 SSDILGKHIYAYLTDEYAVRVESWQTYDTIS--------QDFLGRWCYPLVLDSNIQD----DQT 317

  Fly   288 LSQSPYHGDIVRCYGIQAPRDAIGVRVNNTLSFLAINRKLASIWNNLCGEKHPLISPGAVV-KST 351
            .|....|        |...:|.:          ||.:.|:.         |...|..|..: :.|
Yeast   318 YSYESRH--------IYKEKDVV----------LAQSCKIG---------KCTAIGSGTKIGEGT 355

  Fly   352 QTKEIIAADNAKLSEKTSLNFSVFGPNCIISPKNIVANSLIMSNAIVEEGCNI---DNCIIGHRA 413
            :.:..:...|.::.|...:..|....:|||...:|:.:|||.|||.:  |.|:   |.||||.  
Yeast   356 KIENSVIGRNCQIGENIRIKNSFIWDDCIIGNNSIIDHSLIASNATL--GSNVRLNDGCIIGF-- 416

  Fly   414 QVKSGSVLKNCIIGPNYVVEEGTHSQAVHLSNADQFM 450
                     |..|..|..::..|...|..|.||...|
Yeast   417 ---------NVKIDDNMDLDRNTKISASPLKNAGSRM 444

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF2BgammaNP_611046.2 eIF-2B_gamma_N 4..215 CDD:133041 53/244 (22%)
LbH_eIF2B_gamma_C 357..437 CDD:100057 23/82 (28%)
GCD6NP_010497.3 eIF-2B_epsilon_N 27..243 CDD:133040 52/237 (22%)
glgC <256..408 CDD:179486 37/192 (19%)
LbH_eIF2B_epsilon 344..422 CDD:100061 25/90 (28%)
W2_eIF2B_epsilon 550..704 CDD:211396
Blue background indicates that the domain is not in the aligned region.

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