DRSC/TRiP Functional Genomics Resources

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Protein Alignment eIF2Bgamma and eif2b3

DIOPT Version :9

Sequence 1:NP_611046.2 Gene:eIF2Bgamma / 36722 FlyBaseID:FBgn0034029 Length:455 Species:Drosophila melanogaster
Sequence 2:NP_001016997.2 Gene:eif2b3 / 549751 XenbaseID:XB-GENE-961434 Length:458 Species:Xenopus tropicalis


Alignment Length:475 Identity:155/475 - (32%)
Similarity:264/475 - (55%) Gaps:45/475 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 EFQAVVFAAGRGTRLPEVLGDAPKCLLPVGPYPLIWYPLNLLQQHNFTEVIVVVLEQEKLEIQSA 67
            |.||||.|.|.|:|:.|:....||.|||||..||:|||||:|::..|.|.|||..::.:.|:|.:
 Frog     4 ELQAVVMAVGGGSRMGELTASIPKPLLPVGNRPLLWYPLNMLERAGFEEAIVVTTKEVQREVQKS 68

  Fly    68 LENTPLKLRLDYATIPSD--GDFGTADSLRYIYDKIKSDFLVVSCDLVSNVSLYPLINKFREHDA 130
            ..:|  |::||...:|.|  .:.|||||||:||.|||:|.||.||||::.|:|:.:::.||.|:|
 Frog    69 FPDT--KMKLDIVCLPEDKATEMGTADSLRHIYQKIKTDVLVTSCDLITEVALHEIVDLFRAHNA 131

  Fly   131 ALAMLLFPSGFESDVVMPGPKSKHK--PERDLIGIHAATQRLAFVSAASDCEETLNIQRHLLKNR 193
            :::||:..:. |....:||.|.|.|  .|||.||:......|..::...|.::.||:::.||:..
 Frog   132 SVSMLMRKAS-EPIENVPGLKGKQKAVEERDFIGVDDKGTHLLLLANEEDLDDGLNLKKSLLQRY 195

  Fly   194 GRLDVYSRLVDAHVYVLKKWVIDYLRRKENISTFKGEFLPHLIKKQHSKRPPKTVQDTTSEVGVV 258
            .|:.:...:||||:|.|:|:::|:|....:.|:.:.|.:|:|::||.       :...||:   .
 Frog   196 PRIHIKMGMVDAHLYCLRKYIVDFLAGDHSFSSIRRELIPYLVRKQF-------LSSLTSQ---Q 250

  Fly   259 TKNEDHVLHYVGHTI---LDQKITQTSLFNQSLSQS-----------PYHGDIVRCYGIQAPRDA 309
            .|.|...|:....::   :...|||..|.:::|..|           ||||..:||| :....:.
 Frog   251 KKEEQEELNGGKESMPNDIYSFITQDKLLDRALEMSCWNDHRGDMREPYHGSRLRCY-VHVAGNE 314

  Fly   310 IGVRVNNTLSFLAINRKLASIWNNLC--GEKHPLISPGAVVKSTQTKEIIAADN-----AKLSEK 367
            :..|||:...::..||::..:   ||  ..:.|.:.|.|::..   |.::.||:     .:::||
 Frog   315 LCCRVNSLAMYIDANRQVPRL---LCEVSNEDPRVHPLAMIAD---KLMVGADSMIGAQTQVAEK 373

  Fly   368 TSLNFSVFGPNCIISPKNIVANSLIMSNAIVEEGCNIDNCIIGHRAQVKSGSVLKNCIIGPNYVV 432
            :|:..|:.|.||.|..:..:.|.:||:...::|.|.|...:|.:.|.::||:.:|:|::||..::
 Frog   374 SSIKHSLLGSNCTIKDRVKITNCIIMNEVTIQECCTIQGSVICNNAVIESGADIKDCLVGPGLLI 438

  Fly   433 EEGTHSQAVHLSNADQFMEI 452
            ..........:...:|.|||
 Frog   439 TSKAKRVNEIIMGNEQLMEI 458

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF2BgammaNP_611046.2 eIF-2B_gamma_N 4..215 CDD:133041 89/214 (42%)
GCD1 5..441 CDD:224129 150/460 (33%)
LbH_eIF2B_gamma_C 357..437 CDD:100057 24/84 (29%)
eif2b3NP_001016997.2 GCD1 4..439 CDD:224129 151/454 (33%)
eIF-2B_gamma_N 5..217 CDD:133041 89/214 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 127 1.000 Domainoid score I5312
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H7005
Inparanoid 1 1.050 253 1.000 Inparanoid score I3119
OMA 1 1.010 - - QHG54649
OrthoDB 1 1.010 - - D1388750at2759
OrthoFinder 1 1.000 - - FOG0004788
OrthoInspector 1 1.000 - - oto104179
Panther 1 1.100 - - LDO PTHR45989
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X4472
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1111.080

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