DRSC/TRiP Functional Genomics Resources

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Protein Alignment eIF2Bgamma and AT5G19485

DIOPT Version :9

Sequence 1:NP_611046.2 Gene:eIF2Bgamma / 36722 FlyBaseID:FBgn0034029 Length:455 Species:Drosophila melanogaster
Sequence 2:NP_001031908.1 Gene:AT5G19485 / 3770677 AraportID:AT5G19485 Length:456 Species:Arabidopsis thaliana


Alignment Length:460 Identity:122/460 - (26%)
Similarity:230/460 - (50%) Gaps:41/460 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 EFQAVVFAAGRGTRL-PEVLGDAPKCLLPVGPYPLIWYPLNLLQQHNFTEVIVVVL-EQEKLEIQ 65
            :||.|:.|.|..:.| |.|..:.||.||||...|::.|.|:||:..|..::||||. |...|::.
plant     2 DFQVVILAGGFSSYLVPLVAKEVPKALLPVANRPVLSYVLDLLESSNLKDLIVVVEGEDAALKVG 66

  Fly    66 SALENTPL-KLRLDYATIPSDGDFGTADSLRYIYDKIKS-DFLVVSCDLVSNVSLYPLINKFREH 128
            ..:.:..: :|.::.|.:..  :.|||.:||.|...:.: |.|:||.|:||::....:....|.|
plant    67 GWISSACVDRLHVEVAAVAE--NVGTAGALRAIAHHLTAKDILIVSGDIVSDIPPGAVAATHRRH 129

  Fly   129 DAALAMLLF--PSGFESDVVMPGPKSKHKPER--DLIGIHAATQRLAFVSAASDCEETLNIQRHL 189
            |||:.::|.  |....|:....|.|.|.|...  |:||:.:..|.|.:::..::.::...:::.:
plant   130 DAAVTVMLCAQPVSGPSESGGSGGKDKTKKPACDDIIGLDSLKQFLLYIAKGTEIKKDTRVKKSI 194

  Fly   190 LKNRGRLDVYSRLVDAHVYVLKKWVI-DYLRRKENISTFKGEFLPHLIKKQHSKRPPKTVQDTTS 253
            |...|::::.|.|:|:|:|..|:.|: :.|.:|....:.|.:.||:|::.|       ...|..|
plant   195 LCAAGKMEIRSDLMDSHIYAFKRAVLQEVLDQKPAFRSLKQDVLPYLVRTQ-------LRSDVFS 252

  Fly   254 EVGVVTKN-----EDHVLHYVGHTILDQKITQTSL------FNQSLSQSPYHGDIVRCYGIQAPR 307
            :...|.:|     ::::.:  ...:|.|.::..|:      :...|.....|    :|....|..
plant   253 DQSNVEENGNGNGKNNMQN--NEVVLSQILSNASMPSFHQVYESGLGTRKTH----KCCVYIADE 311

  Fly   308 DAIGVRVNNTLSFLAINRKLASIWNNLCG----EKHPLISPGAVV--KSTQTKEIIAADNAKLSE 366
            ....||:|:..:|:.:||.:....|:|.|    ..|.::.|.|.:  |:|.....:..:.:::.:
plant   312 SKYFVRLNSIQAFMDVNRDVIGESNHLSGYSFSAHHNIVHPSAELGSKTTVGPHCMLGEGSQVGD 376

  Fly   367 KTSLNFSVFGPNCIISPKNIVANSLIMSNAIVEEGCNIDNCIIGHRAQVKSGSVLKNCIIGPNYV 431
            |.|:..||.|.:|.|.....:.||::|.:|.:.:||:|...:|...||::....|::|.:...||
plant   377 KCSVKRSVIGRHCRIGSNVKIVNSVVMDHATIGDGCSIQGSVICSNAQLQERVTLRDCQVEAGYV 441

  Fly   432 VEEGT 436
            |..|:
plant   442 VCAGS 446

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF2BgammaNP_611046.2 eIF-2B_gamma_N 4..215 CDD:133041 66/218 (30%)
GCD1 5..441 CDD:224129 121/458 (26%)
LbH_eIF2B_gamma_C 357..437 CDD:100057 23/80 (29%)
AT5G19485NP_001031908.1 eIF-2B_gamma_N 3..220 CDD:133041 66/218 (30%)
GCD1 4..442 CDD:224129 118/452 (26%)
LbH_eIF2B_gamma_C 367..447 CDD:100057 23/80 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 58 1.000 Domainoid score I3976
eggNOG 1 0.900 - - E1_COG1208
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H7005
Inparanoid 1 1.050 150 1.000 Inparanoid score I1712
OMA 1 1.010 - - QHG54649
OrthoDB 1 1.010 - - D1388750at2759
OrthoFinder 1 1.000 - - FOG0004788
OrthoInspector 1 1.000 - - oto4249
orthoMCL 1 0.900 - - OOG6_102755
Panther 1 1.100 - - LDO PTHR45989
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1312.840

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