DRSC/TRiP Functional Genomics Resources

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Protein Alignment eIF2Bgamma and eif-2Bgamma

DIOPT Version :9

Sequence 1:NP_611046.2 Gene:eIF2Bgamma / 36722 FlyBaseID:FBgn0034029 Length:455 Species:Drosophila melanogaster
Sequence 2:NP_495428.1 Gene:eif-2Bgamma / 174138 WormBaseID:WBGene00004090 Length:404 Species:Caenorhabditis elegans


Alignment Length:459 Identity:116/459 - (25%)
Similarity:201/459 - (43%) Gaps:87/459 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MTEFQAVVFAAGRGTRLPEVLGDAPKCLLPVGPYPLIWYPLNLLQQHNFTEVIVVVLEQEKLEIQ 65
            |.|.|.::..:|.|||:|.:.....||||||...|:..|||:.|.:...|::.:.|.|..:|.::
 Worm     1 MHEMQGILLCSGGGTRMPVLTRHVQKCLLPVVGVPMFLYPLSSLLRTGITDIKIFVREVLQLTLE 65

  Fly    66 SALENTPL----KLRLDYATIPSDGDFGTADSLRYIYDKIKSDFLVVSCDLVSNVSLYPLINKFR 126
            ..::.:.|    ...::|..:..: ||||||.|:..:.||..|.|:||||.:|:.||.||::.||
 Worm    66 KEVKKSKLLEKYPAHIEYICVNQE-DFGTADLLKNHHSKITKDALIVSCDFISDASLIPLVDFFR 129

  Fly   127 EHDAALAMLLFPSGFESDVVMPGPKSKHKPERDLIGIHAATQRLAFVSAASDCEETLNIQRHLLK 191
            ..::.|..|:..:...:..  ||.|||.....|::.|..:|.:|||:....|.:..|.:::. ||
 Worm   130 ATNSTLVALIADTCVNAPA--PGSKSKKPKATDVMAIVESTGQLAFLCGDDDFDAPLVMEKS-LK 191

  Fly   192 NRGRLDVYSRLVDAHVYVLKKWVIDYLRRKENISTFKGEFLPHLIKKQHSKRPPKTVQDTTSEVG 256
            ....:.:.|:..|.|||.::..|:..|.:.::||:||.:|:|.||.||..               
 Worm   192 IFPSIKLTSKYNDCHVYAIRHKVLLNLSKSKHISSFKADFVPLLIDKQFE--------------- 241

  Fly   257 VVTKNEDHVLHYVGHTILDQKITQTSLFNQSLSQSPYHGDIVRCYGIQAPRDAIGVRVN-NTL-S 319
               .:.|                                  ::|:..:.|.:...|..: ||| |
 Worm   242 ---PDSD----------------------------------IKCFAYRLPHENGFVTAHANTLGS 269

  Fly   320 FLAINRKLASIWNNL-----------------CGEKHPLISPGAVVKSTQTKEIIAADNAKLSEK 367
            :..:|:.:...:..|                 ...:..:.....:.|.:..|....:||.::.||
 Worm   270 YFEVNKAIQKSFTRLMEYRGNGKNFNYKTDKIAAHESRIEESAEIDKDSVIKRSFISDNCRIGEK 334

  Fly   368 TSLNFSVFGPNCIISPKNIVANSLIMSNAIVEEGCNIDNCIIGHRAQVKS-GSVLKNCIIGPNYV 431
            |.|..|:.....:|.....::||:|.....:.|..::.|||:....:|.: |.|       .|.|
 Worm   335 TKLKESIIAKGVVIGNGASISNSIICDGVEIGENADVTNCIVAKDQKVPAKGKV-------QNEV 392

  Fly   432 VEEG 435
            ||:|
 Worm   393 VEDG 396

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF2BgammaNP_611046.2 eIF-2B_gamma_N 4..215 CDD:133041 67/214 (31%)
GCD1 5..441 CDD:224129 114/455 (25%)
LbH_eIF2B_gamma_C 357..437 CDD:100057 23/80 (29%)
eif-2BgammaNP_495428.1 GCD1 3..388 CDD:224129 109/440 (25%)
eIF-2B_gamma_N 4..215 CDD:133041 67/214 (31%)
LbH_G1P_AT_C_like 307..384 CDD:100046 18/76 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160159124
Domainoid 1 1.000 83 1.000 Domainoid score I5361
eggNOG 1 0.900 - - E1_COG1208
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H7005
Inparanoid 1 1.050 144 1.000 Inparanoid score I3038
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54649
OrthoDB 1 1.010 - - D1388750at2759
OrthoFinder 1 1.000 - - FOG0004788
OrthoInspector 1 1.000 - - oto19862
orthoMCL 1 0.900 - - OOG6_102755
Panther 1 1.100 - - LDO PTHR45989
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R375
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1615.800

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