DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Khc-73 and AT5G42490

DIOPT Version :9

Sequence 1:NP_001261000.1 Gene:Khc-73 / 36718 FlyBaseID:FBgn0019968 Length:1957 Species:Drosophila melanogaster
Sequence 2:NP_199064.1 Gene:AT5G42490 / 834256 AraportID:AT5G42490 Length:1087 Species:Arabidopsis thaliana


Alignment Length:1303 Identity:286/1303 - (21%)
Similarity:456/1303 - (34%) Gaps:453/1303 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAS----DKIKVAVRVRPFNRREIELDTKCIVEMEKQQTIL--QNPPPLEKIERKQ-PKTFAFDH 58
            |||    :||.|:|||||.|.:|...:..|..|.....||:  .|.|     ||.. |.|:.||.
plant     1 MASGGKGEKILVSVRVRPQNEKEKARNDICDWECVNNTTIVCNNNLP-----ERSLFPSTYTFDK 60

  Fly    59 CFYSLNPEDENF--ASQETVFDCVGRGILDNAFQGYNACIFAYGQTGSGKSYTMMGTQESKGIIP 121
            .|...:|..:.:  .::|.....:|         |.|:.|||||||.|||:|||.      ||..
plant    61 VFGFDSPTKQVYEDGAKEVALCVLG---------GINSSIFAYGQTSSGKTYTMC------GITK 110

  Fly   122 RLCDQLFSAIANKSTPELMYKVEVSYMEIYNEKVHDLLDPKPNKQSLKVREHNVMGPYVDGLSQL 186
            ...|.:|..| .|.| :..:.::.|.:|||||.|.|||....|::  ::.:....|..|:.|.:.
plant   111 FAMDDIFCYI-QKHT-DRKFTLKFSAIEIYNEAVRDLLSGDNNQR--RLLDDPERGTVVEKLIEE 171

  Fly   187 AVTSYQDIDNLMTEGNKSRTVAATNMNAESSRSHAVFSVVLTQILTDQATGVSGEKVSRMSLVDL 251
            .:.....::.|:|.....|.:..|::|..|||||.:..:.:.....:.:...|....:.:..:||
plant   172 TIQDRTHLEELLTVCETQRKIGETSLNEVSSRSHQILRLTIESTGREYSPDSSSTLAASVCFIDL 236

  Fly   252 AGSERAVKTGAVGDRLKEGSNINKSLTTLGLVISKLADQSNGKKSGNDKFVP--YRDSVLTWLLK 314
            ||||||.:|.:.|.|||||.:||:||.|||.||.||            :|.|  ...|.:..|||
plant   237 AGSERASQTLSAGTRLKEGCHINRSLLTLGTVIRKL------------RFDPCDIAQSQVENLLK 289

  Fly   315 DNLGGNSRTV----MVATISPSAD----NYEET----------LSTLRYA-------------DR 348
            ......|..:    |.:::...||    :|:.|          |:...:.             |:
plant   290 STAEERSSRMDEQSMFSSMDFDADFRRRSYDSTDLGEPSIINNLTERNFEFLENSEEDDFLLDDK 354

  Fly   349 AKRIVNHAVVNEDPNARIIRELR-----HEVETLRSMLKHATGSP--------VGDVQDKLAESE 400
            ..:...|.:.::......|.:.|     .||..:....:.::|.|        :.|:.||:|.||
plant   355 TPQFSRHNLYDDWEELVQITDERLEDACKEVRCIEPEAEQSSGQPAACESHDSLDDIVDKIAISE 419

  Fly   401 NLMKQISQTWEEKLVKTERIQN-------ERQQALEKMGISVQAS------GIKVEKN-KYYLVN 451
            .|    |...||.|...|..|:       |:.:. |.|.||:.|:      .::.|:: ..|..|
plant   420 VL----SPRKEETLPGLEHEQSYNPSTGIEKAEN-EDMEISIPAAKEETLPALEYEQSYNSYTGN 479

  Fly   452 LNADPSLNELLVYYLKDRTLIGGRTISGQQPDIQLSGLGIQPEHCVITIEDSGLYMEPVQGARCF 516
            ..|:   ||::             .||..:.|..||.|..:..:                     
plant   480 ERAE---NEVM-------------EISTPRKDEPLSALEYEQSY--------------------- 507

  Fly   517 VNGSAAVEKTPLQNGDRILWGNHHFFRVNSPKSNNTSMCASEPQTPAQ---------LIDYNFAR 572
             |.|.:.||.  :|.|                        .|..|||:         .||.| |:
plant   508 -NSSTSNEKA--ENED------------------------MEISTPAEKENVDLSLKTIDVN-AK 544

  Fly   573 DEIMQNELSNDPIQTAIARLERQHEEDKQVALEKQRQEYERQFQQLRNILSPSTPYAPY------ 631
            .|..:..|.|..::.. ..:|.| |..:.|..|:|.:..||:       :||||..|..      
plant   545 PETYELTLKNSDLEIG-PSVEAQ-ESQESVNEEEQMKNEERK-------MSPSTKQAEQCLNKEE 600

  Fly   632 -----------APYDPLRMG---------KITPN------TPTSQMRVEKW----AQERDEMFRR 666
                       ...:.|.:.         ::|||      ..||:   :||    .||.|:....
plant   601 NAQSEQQSTEDCELNSLPINNQSEATVEVELTPNDAKLDEDATSR---DKWESKQQQEADKDCNE 662

  Fly   667 S-----LGQLKTDIMRANSLVQEANFLAEEMEKKTKFSVTLQIPPANLSPNRRRGAFVSEPA-IL 725
            |     :|....|    |..........:||:||.::.:::.......||:.||. |.|.|. ..
plant   663 SSVCKNIGTDDND----NDTYMALKEKVKEMQKKIEYLMSMHTAEQQQSPSFRRD-FKSPPEYFT 722

  Fly   726 VKRTNS--------GSQIW--TMEKLENKLIDMREMYQEHKERVLN------------GLDEDNA 768
            .||:.|        .|..|  ::|...|.....|.|..:......|            .:|..:.
plant   723 AKRSRSCRENLLSVRSPHWFESLEVSNNTSPTWRVMQTKASPGRPNTSSISFDSGSSTSIDTRSL 787

  Fly   769 KPQDPFYESQENHNLIGVANIFLEVL---------FHDV----KLDYHTPIISQQGEVAGRLQVE 820
            |..||           .:.|.|.|.:         .|.:    :|||..|....:.|   |:::.
plant   788 KDYDP-----------EMGNSFREFVAGLEEMAKKHHSIDSTPELDYGIPYAPTKTE---RMEIR 838

  Fly   821 IERIAGQM---------PQDRMCESVSESSGDS-RDEYDDPVDPTSNQITCRVTIKCASGLPLSL 875
            .|..|..:         |||...|:...::..| |::..|.|:....:.|               
plant   839 PESPADSVRGNENALPNPQDINKETTDATNNQSQREQVGDSVEEAKPKET--------------- 888

  Fly   876 SNFVFCQYTFWGHQEMVVPVINAESTAHDQNMVFKFEHTQDFTVTINEEFLEHCIEGALSIEVWG 940
                                   :||...|                  |.|:....|..||.   
plant   889 -----------------------DSTEASQ------------------EKLQVAANGQYSIS--- 909

  Fly   941 HRSAGFSKTKGWEVEQQQAKARSLVDRWAELSRKIELWVEIHEL-------NDNGEYSPVEVTNR 998
              |:.|        |:||   |.:::.||..:..:     :|..       .|..:|..:||   
plant   910 --SSDF--------ERQQ---RKIIELWAACNVPL-----VHRTYFFLLFKGDPSDYVYMEV--- 953

  Fly   999 NEVLTGGIYQLRQGQQRRVNVRVKPVQNSGTLPIICQSIVNVAIGSVTVRSRLQRPLDSYQEEDL 1063
                     :||:                  |..:.|:|.|                      |:
plant   954 ---------ELRR------------------LSFLKQTISN----------------------DM 969

  Fly  1064 TVLREKWSEALGRRRQYLDQQIQMLIKKEEKNEQ------------ERERELSLVHQWVSLTEER 1116
            ...|.:..:||.|.::::.:|   |.||...|::            .::|.|.:.|:..:.|::.
plant   970 ETSRMQTVKALTREKEWISKQ---LPKKFPWNQRIGLYQKWGVEVNSKQRSLQVAHKLWTNTQDM 1031

  Fly  1117 NAV 1119
            :.:
plant  1032 DHI 1034

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Khc-73NP_001261000.1 KISc_KIF1A_KIF1B 4..359 CDD:276816 114/392 (29%)
KISc 6..359 CDD:214526 113/390 (29%)
Kinesin_assoc 356..468 CDD:292801 31/138 (22%)
FHA 446..546 CDD:238017 17/99 (17%)
KIF1B 741..786 CDD:289208 8/56 (14%)
DUF3694 <1196..1252 CDD:289256
CAP_GLY 1786..1850 CDD:279625
AT5G42490NP_199064.1 Motor_domain 9..272 CDD:277568 97/286 (34%)
DUF3490 913..1065 CDD:288820 32/193 (17%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

Return to query results.
Submit another query.