DRSC/TRiP Functional Genomics Resources

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Protein Alignment Khc-73 and kif18a

DIOPT Version :9

Sequence 1:NP_001261000.1 Gene:Khc-73 / 36718 FlyBaseID:FBgn0019968 Length:1957 Species:Drosophila melanogaster
Sequence 2:NP_956533.1 Gene:kif18a / 393209 ZFINID:ZDB-GENE-040426-862 Length:895 Species:Danio rerio


Alignment Length:660 Identity:204/660 - (30%)
Similarity:312/660 - (47%) Gaps:139/660 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 IKVAVRVRPFNRREIELDTKCIVEMEKQQTILQNPPPLE------------KIERKQPK--TFAF 56
            :||.|||||.|.:|.:.:.|.:|.:.....::.:|...|            .:.::..|  .|.|
Zfish    10 VKVVVRVRPLNDKEKDGNFKKVVHVVDNHMLVFDPKEEEVTFFRGQRVGNRDVRKRANKDLKFVF 74

  Fly    57 DHCFYSLNPEDENFASQETVFDCVGRGILDNAFQGYNACIFAYGQTGSGKSYTMMGTQESKGIIP 121
            |..|     .:|  :||..||:...:.|:|....|||..:||||.||:||::||:||..|.|::.
Zfish    75 DSVF-----GEE--SSQIEVFENTTKAIVDGVLNGYNCTVFAYGATGAGKTHTMLGTSNSPGVMF 132

  Fly   122 RLCDQLFSAIANKSTPELMYKVEVSYMEIYNEKVHDLLDPKPNKQSLKVREHNVMGPYVDGLSQL 186
            ....:||:.: :....:.::.|..||:|:|||::.|||   .|...|.|||....|..|.||:..
Zfish   133 LTMKELFARM-DLIKEDKVFNVAFSYLEVYNEQIRDLL---TNSGPLAVREDGSNGVVVQGLTLH 193

  Fly   187 AVTSYQDIDNLMTEGNKSRTVAATNMNAESSRSHAVFSVVLTQILTDQATGVS-GEKVSRMSLVD 250
            ...|.:.|...:..||::||...|:|||.||||||||.:.|.|  .|:...:: ..:|::|||:|
Zfish   194 QPKSAEHILEALDYGNRNRTQHPTDMNATSSRSHAVFQIYLRQ--QDKTASLNPNVRVAKMSLID 256

  Fly   251 LAGSERAVKTGAVGDRLKEGSNINKSLTTLGLVISKLADQSNGKKSGNDKFVPYRDSVLTWLLKD 315
            |||||||..|...|.||:||:|||:||..||.||:.||:....|     ..:|||||.||.||||
Zfish   257 LAGSERASATNTKGARLREGANINRSLLALGNVINTLANPKCKK-----THIPYRDSKLTRLLKD 316

  Fly   316 NLGGNSRTVMVATISPSADNYEETLSTLRYADRAKRIVNHAVVNEDPNARIIRELRHEVETLRSM 380
            :||||.||||:|.:|||:.:||:|.:||:||:|||.|.:                     ||||.
Zfish   317 SLGGNCRTVMIANVSPSSLSYEDTHNTLKYANRAKEIKS---------------------TLRSN 360

  Fly   381 LKHATGSPVGD---VQDKLAESENLMKQISQTWEEKLVKTER-----IQNERQQALEKMGISVQ- 436
            :. :..|.:|.   :.:|......::||..:.:||:  |.|.     |..:::...|||..|:: 
Zfish   361 VM-SLDSHIGQYAIICEKQKAEIVMLKQKLKEYEER--KAEAPALNPISIQKRAEFEKMSESLRS 422

  Fly   437 --ASGIKVEKNKYYLVNLNADPSLNELLVYYLKDRTLIGGRTISGQQ-----PD----------- 483
              :..:|:.|.     :|:.:..|||       .|..:..|....||     ||           
Zfish   423 VFSDRLKLRKE-----HLDIEKQLNE-------SRLTMRHRESWHQQSLIFFPDNKAERATCKYE 475

  Fly   484 IQLSGLGIQPEHCVITIEDSGLYMEPVQGARCFVNGSAAVEKTPLQNGDRILWGNHHFFRVNSPK 548
            .:|:.|....||         |....::..:||......:.:  ::|..::|..:.|        
Zfish   476 RKLASLKSHQEH---------LQQRLMESEKCFQENEGWLHR--IENEMKLLGHDGH-------- 521

  Fly   549 SNNTSMCASEPQTPAQLIDYNFARDEIMQNELSNDPIQTAIARLERQHEEDKQVALEKQRQEYER 613
                        ||.:|           :.||....:|..|:.|: ||.|.....:..|.||...
Zfish   522 ------------TPEEL-----------KKELQCHQLQLQISDLQ-QHMEHMSHLISVQDQENTH 562

  Fly   614 QFQQLRNILS 623
            ..:.:..:||
Zfish   563 THKLVNALLS 572

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Khc-73NP_001261000.1 KISc_KIF1A_KIF1B 4..359 CDD:276816 148/367 (40%)
KISc 6..359 CDD:214526 148/367 (40%)
Kinesin_assoc 356..468 CDD:292801 24/122 (20%)
FHA 446..546 CDD:238017 20/115 (17%)
KIF1B 741..786 CDD:289208
DUF3694 <1196..1252 CDD:289256
CAP_GLY 1786..1850 CDD:279625
kif18aNP_956533.1 KISc 9..354 CDD:214526 147/361 (41%)
KISc_KIP3_like 9..353 CDD:276821 147/360 (41%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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