DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Khc-73 and Kif28

DIOPT Version :9

Sequence 1:NP_001261000.1 Gene:Khc-73 / 36718 FlyBaseID:FBgn0019968 Length:1957 Species:Drosophila melanogaster
Sequence 2:NP_001357826.1 Gene:Kif28 / 383592 MGIID:2686151 Length:1033 Species:Mus musculus


Alignment Length:1198 Identity:347/1198 - (28%)
Similarity:540/1198 - (45%) Gaps:257/1198 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 SDKIKVAVRVRPFNRREIELDTKCIVEMEKQQTILQNPPPLEKIERKQPKTFAFDHCFYS----- 62
            ||.::||||||||::||....::|::.|......:::|...|::     |||.||..::|     
Mouse    14 SDSVRVAVRVRPFSQREKNSGSQCVISMHSGNISIRDPKNEERV-----KTFTFDLTYWSHDGFQ 73

  Fly    63 ------LNPED--ENFASQETVFDCVGRGILDNAFQGYNACIFAYGQTGSGKSYTMMGTQESKGI 119
                  |.|.|  ..||.|..||..:||||||:|::||||.:.|||||||||||:|:|...:||:
Mouse    74 KDEDGVLIPSDPASKFAGQSDVFHDIGRGILDSAWRGYNATLLAYGQTGSGKSYSMIGFGTNKGL 138

  Fly   120 IPRLCDQLFSAIANKS---TPELMYKVEVSYMEIYNEKVHDLLDPKPNKQSLKVREHNVMGPYVD 181
            |||:|::||.||..:.   .|::|:    |.:|||||::.|||........|:|||...:|.:|:
Mouse   139 IPRVCEELFQAIEKQKENLEPQVMF----SMLEIYNEQIRDLLSRTKAPGGLRVREDQQLGFFVE 199

  Fly   182 GLSQLAVTSYQDIDNLMTEGNKSRTVAATNMNAESSRSHAVFSVVLTQILTDQATGVSGEKVSRM 246
            ||..:...:|..|:.|:.:|:|.|..|:|||||.|||||.:.::...|:..|.|.    .|.|.:
Mouse   200 GLKWVPCENYAQIEKLVEQGSKIRMTASTNMNASSSRSHMLIAIQFKQVFLDTAL----TKRSSI 260

  Fly   247 SLVDLAGSERAVKTGAVGDRLKEGSNINKSLTTLGLVISKLADQSNGKKSGNDKFVPYRDSVLTW 311
            ::||||||||...:|:.||||:|||.:|.|||:||.|||.|||.:.|||.   ..:||||||||.
Mouse   261 NMVDLAGSERQRSSGSEGDRLREGSRVNLSLTSLGNVISALADLAMGKKV---LHIPYRDSVLTK 322

  Fly   312 LLKDNLGGNSRTVMVATISPSADNYEETLSTLRYADRAKRIVNHAVVNEDPNARIIRELRHEVET 376
            ||:..|||||||.::|.:||:...|||||||||||:|||::.|.||:|..|.||..|       .
Mouse   323 LLQSALGGNSRTTLIAALSPADICYEETLSTLRYAERAKKVRNRAVINTCPLARASR-------A 380

  Fly   377 LRSMLKHATGSPVGDVQDKLAESENLMKQISQTWEEKLVKTERIQNERQQALEKMGISVQASGIK 441
            ..::|....|:...:........:.|..|  .||.:.|.:..|...|:.:||.:..        |
Mouse   381 ENALLLGFRGAGAAEHPACFWAEQQLGNQ--GTWAQLLEQARREWEEQYEALTQEQ--------K 435

  Fly   442 VEKNKYYLVNLNADPSLNELLVYYLKDRTLIGGRTISGQQPDIQLSGLGIQPEHCVITIEDSGLY 506
            :.:...:|:|:|.||.|..:|.:::.:.:...||..|..   |.|.||||..:|......|..:.
Mouse   436 MVRILPHLLNVNEDPQLTGVLKFFIHNGSCDVGRAASNA---ICLQGLGISDKHASFVNLDGKVT 497

  Fly   507 MEPVQGARCFVNGSAAVEKTPLQNGDRILWG-NHHFFRVNSPKSNNTSMCASEPQTPAQLIDYNF 570
            :.|....:..|||.....:|.||:.|||:.| |..|..|..|......        .....||:|
Mouse   498 VAPHSKCKVIVNGVPVTGRTKLQHLDRIILGSNSAFLYVGFPSERGAE--------DLSRFDYDF 554

  Fly   571 ARDEIMQNELSNDPIQTAIARLERQHEEDKQVALEKQRQEYERQFQQLRNILSPSTPYAPYAPYD 635
                               .:|||...|...||                                
Mouse   555 -------------------FQLERAAAEGVSVA-------------------------------- 568

  Fly   636 PLRMGKITPNTPTSQMRVEKWAQERDEMFRRSLGQLKTDIMRANSLVQEANFLAEEMEKKTKFSV 700
              .:|.::|.               |:....|:..:..|.::...||.|||.::||::|    .:
Mouse   569 --TLGCVSPG---------------DDQADPSILAVFQDYVKLMPLVVEANQMSEELKK----GL 612

  Fly   701 TLQIPPANLSPNRRRGAFVSEPAILVKRTNSGSQ---IWTMEKLENKLIDMREMYQEHKERVLNG 762
            |:::...||:.:..|| :..:..::||.|..|:.   ||:..|..|:...|.|:||    |.|..
Mouse   613 TMELKVKNLASSDSRG-YDLQKEVMVKVTKQGTHEVWIWSKAKFINRKFLMEELYQ----RFLES 672

  Fly   763 LDEDNAKPQDPFYESQENHNLIGVANIFLEVLFHDVKLDYHTPIISQQGEVAGRLQVEIERIAGQ 827
            .|...|:..|||::..|..:| |.|:::|:.|.|.:.|:.....::..|.....|.:.|      
Mouse   673 RDSHVAQEDDPFWDPLEVVHL-GSAHVWLQPLAHCMMLEEQVEFLNCDGLEEAVLHIRI------ 730

  Fly   828 MPQDRMCESVSESSGDSRDEYDDPVDPTSNQITCRVTIKCASGLPLSLSNFVFCQYTFWGHQ--- 889
                ..|.....:.|: .|...||::....:|..:             ::.|.|....|..:   
Mouse   731 ----TPCSPEGWAHGE-EDMVIDPLELLGKRIDFQ-------------THIVRCLGVKWLKEDGS 777

  Fly   890 ---EMVVPVINAESTAHDQNMVFK-----FEHTQDF-TVTINEEFLEHCIEGALSIEVWGHRSA- 944
               :|...:.:..:|.:.: .|:|     .|.|..| .:..:.|||::.:..||.:::||.:.. 
Mouse   778 RGIQMGYKIYDLPNTLYTK-PVWKSVNPRIEETVHFAALGASREFLDYLLTNALIVDLWGLQEGC 841

  Fly   945 ---GFSKTKGWEVEQQQAKARSLVDRWAELSRKIELWVEIHELNDNGEYSPVE-----VTNRNEV 1001
               |.|:.                        .:.|..|.|.:.|...:|.|:     .:|:...
Mouse   842 APLGVSQL------------------------DVLLTGEGHIMVDTKTFSSVKDVSQITSNQVPE 882

  Fly  1002 LTGGIYQLRQGQQ---------RRVNVRVK-PVQNSGTLPIICQSIVNVAIGSVTVRSR------ 1050
            |...:.:|.|..:         |..||.:| .::|:|:.| ..|.:.|.. |:....:|      
Mouse   883 LYQKLLKLEQETELLRDVNRALRGENVFLKASLENAGSAP-QAQKLDNPE-GATRTAAREAKQVC 945

  Fly  1051 -LQRPLDSYQEEDLTVLREKWSEALG-----RR----------RQYLDQQIQMLIKKEEKNEQER 1099
             .|...|:.....|.|..:....|.|     ||          |.::.||.|||...|:..|   
Mouse   946 AQQASSDAQLARALKVFYQGMGVARGQLLRLRRCRPPEDDQMLRPFVHQQSQMLKDLEDLLE--- 1007

  Fly  1100 ERELSLVHQWVS----LTEERNAVLVPA 1123
                |.:|:..:    :.::|...|:|:
Mouse  1008 ----SSLHKLKADVAFIVKKRKEYLLPS 1031

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Khc-73NP_001261000.1 KISc_KIF1A_KIF1B 4..359 CDD:276816 172/370 (46%)
KISc 6..359 CDD:214526 171/368 (46%)
Kinesin_assoc 356..468 CDD:292801 26/111 (23%)
FHA 446..546 CDD:238017 32/100 (32%)
KIF1B 741..786 CDD:289208 14/44 (32%)
DUF3694 <1196..1252 CDD:289256
CAP_GLY 1786..1850 CDD:279625
Kif28NP_001357826.1 Motor_domain 15..370 CDD:354959 172/370 (46%)
FHA 440..537 CDD:238017 31/99 (31%)
KIF1B 655..693 CDD:372100 13/41 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D76316at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100247
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

Return to query results.
Submit another query.