DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Khc-73 and klp-6

DIOPT Version :9

Sequence 1:NP_001261000.1 Gene:Khc-73 / 36718 FlyBaseID:FBgn0019968 Length:1957 Species:Drosophila melanogaster
Sequence 2:NP_498069.1 Gene:klp-6 / 175683 WormBaseID:WBGene00002218 Length:928 Species:Caenorhabditis elegans


Alignment Length:1102 Identity:350/1102 - (31%)
Similarity:525/1102 - (47%) Gaps:242/1102 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 DKIKVAVRVRPFNRREIELDTKCIVEM-EKQQTILQNPPPLEKIERKQPKTFAFDHCFYS----- 62
            |.|.|||||||||.||...:.|.::|| :::.|::::|      :....|.|.:||.::|     
 Worm     5 DSIIVAVRVRPFNDREKTRNCKLVIEMPDEETTVIRDP------KTNDEKRFTYDHSYWSHDGFS 63

  Fly    63 ------LNPEDENFASQETVFDCVGRGILDNAFQGYNACIFAYGQTGSGKSYTMMGTQESKGIIP 121
                  |.|.|.::|.|..||:.:|||:|.||:.|||..:||||||||||||:::|.:.:|||:|
 Worm    64 EKKNGYLEPTDPHYADQRRVFEDLGRGVLANAWAGYNCSLFAYGQTGSGKSYSIVGFKNNKGIVP 128

  Fly   122 RLCDQLFSAIANKSTPELMYKVEVSYMEIYNEKVHDLL-DPKPNKQSLKVREHNVMGPYVDGLSQ 185
            .:|::||..||:.....:.::|.||.||||.|||.||| ...|.|..||||||...|.||:.|:.
 Worm   129 IVCEELFKQIADNKKKNMQFEVFVSMMEIYCEKVRDLLSSTPPPKGGLKVREHPKNGFYVENLTT 193

  Fly   186 LAVTSYQDIDNLMTEGNKSRTVAATNMNAESSRSHAVFSVVLTQILTDQATGVSGEKVSRMSLVD 250
            :.|.|:::|:..:.||.||||:|||.|||.|||:|.:..:...|..:.||.|.|.:| |.::|||
 Worm   194 VPVNSFKEIEAKIEEGTKSRTIAATQMNATSSRAHTIVKITFNQKSSKQAGGTSMKK-SEINLVD 257

  Fly   251 LAGSERAVKTGAVGDRLKEGSNINKSLTTLGLVISKLADQSNGKKSGNDKFVPYRDSVLTWLLKD 315
            ||||||....|..|||||||..||:||||||.||..|.| |...|||....:||||||||.|||:
 Worm   258 LAGSERQSAAGTEGDRLKEGIVINQSLTTLGRVIKALHD-SQKAKSGKKTQIPYRDSVLTCLLKN 321

  Fly   316 NLGGNSRTVMVATISPSADNYEETLSTLRYADRAKRIVNHAVVNEDPNARIIRELRHEVETLRSM 380
            .|||||:|:|:|.|||:..|:||||||||:|||||.|..:|||||:...|.:||||.|...|:|.
 Worm   322 ALGGNSKTIMIAAISPADINFEETLSTLRFADRAKSIKTNAVVNENQTERALRELREENLRLQSQ 386

  Fly   381 LKHATGSPVGDVQD--------KLAESENLMKQISQTWEEKLVKTERIQNERQQALEKMGISVQA 437
            ::   |...||..:        :|||::..|:::.::|::|:  .|........|.||:.:..: 
 Worm   387 IQ---GGTAGDASNEEIEKLRRQLAENQKEMEEMEKSWQQKI--AEEAAKHASGASEKVEMEAK- 445

  Fly   438 SGIKVEKNKYYLVNLNADPSLNELLVYYLKDRTLIGGRTISGQQPD-----IQLSGLGIQPEHCV 497
                 :|...:|.|||.||:|..::|:::.     .|.::.|.:|.     ||:|||.|.|:|  
 Worm   446 -----KKKMCHLWNLNEDPALTNVIVHFIP-----VGESVVGNKPTSSGNFIQMSGLSILPQH-- 498

  Fly   498 ITIEDSG---LYMEPV-QGARCFVNGSAAVEKTPLQNGDRILWGNHHFFRVNSP--KSNNTSMCA 556
            :|:::.|   :::.|. :....|:||.....:|.||..||:.:|.:|.:..|:|  |...|.   
 Worm   499 VTLKNDGNNQIHLSPCSEDLDIFINGKPVHGETQLQQNDRVFFGGNHLYVFNNPTKKGIRTD--- 560

  Fly   557 SEPQTPAQLIDYNFARDEIMQNELSNDPIQTAIARLERQHEEDKQVALEKQRQEYERQFQQLRNI 621
                     |.|..|:.||.||..:                                        
 Worm   561 ---------ITYENAQAEIAQNHAA---------------------------------------- 576

  Fly   622 LSPSTPYAPYAPYDPLRMGKITPNTPTSQMRVEKWAQERDEMFRRSLGQ-------LKTDIMRAN 679
                                                    .:..|.||.       |:.::|...
 Worm   577 ----------------------------------------ALGNRGLGGGSKRDLILEEELMSTL 601

  Fly   680 SLVQEANFLAEEMEKKTKFSVTLQIPPANLSPNRRRGAFVSEPAILVKRTNSGSQ---IWTMEKL 741
            .|||.||.:|.|:.:..||.:.|..|       ..||.......|.||..|....   :|...:.
 Worm   602 PLVQRANAMATELGRNVKFEIVLVSP-------EMRGLTSGLTEIWVKVHNISEDTYFLWEKSRF 659

  Fly   742 ENKLIDMREMYQEHKERVLNGLDEDN-AKPQDPFYESQENHNLIGVANIFLEVLFHDVKLDYHTP 805
            .|:...|:|||:..::    |.::.| .|.:|||||..::...|..:.:||:.|.:.:.::...|
 Worm   660 MNRYYGMQEMYEAKQD----GSEDWNMPKERDPFYEPPDSPVFIASSVVFLQSLAYLIDVEEQFP 720

  Fly   806 IISQQGEVAGRLQVEIERIAGQMPQDRMCESVSESSGDSRDEY-DDPVDPTSNQITCRVTIKCAS 869
            |:...|:..|.|.|      |..|    |   |.:..:.|.|| :||.......|..:|.:..|.
 Worm   721 IVDLSGQEIGLLTV------GLSP----C---STTGKELRGEYVEDPDQLIGKNIAFKVKVISAV 772

  Fly   870 GLPLSL--SNFVFCQYTFWGHQEMVVPVI---NAESTAHDQNMVFKFEHTQDFTVTINEEFLEHC 929
            |||..:  ||   |:|.|:|.::|.....   |..:..|::...||         .:.:|..::.
 Worm   773 GLPRRILKSN---CKYRFFGSKKMTTTATVSGNTPAYGHEETFQFK---------PVTKEVADYL 825

  Fly   930 IEGALSIEVWG-HRSAGFSKTKGWEVEQQQAKARSLVDRWAELSRKIELWVEIHELNDNGEYSPV 993
            ....|.|..|| .|..|.|                        |||       :.::..|.....
 Worm   826 ANSNLYITFWGTQRPRGAS------------------------SRK-------NSISTIGSNEAR 859

  Fly   994 EVTNRNEVLTGGIYQLRQGQQRRVNVR-----VKPVQNSGTLPIICQSIVNVAIGSVTVRSR 1050
            |..|:.:.:...::|.:..:.|.::|:     :|.|.::.......||:...  ||.|::||
 Worm   860 EGPNKAKRVERLVHQAKTSENRNISVKALETVLKGVDDNENRKTRKQSMKKA--GSTTIKSR 919

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Khc-73NP_001261000.1 KISc_KIF1A_KIF1B 4..359 CDD:276816 184/367 (50%)
KISc 6..359 CDD:214526 183/365 (50%)
Kinesin_assoc 356..468 CDD:292801 35/119 (29%)
FHA 446..546 CDD:238017 32/108 (30%)
KIF1B 741..786 CDD:289208 14/45 (31%)
DUF3694 <1196..1252 CDD:289256
CAP_GLY 1786..1850 CDD:279625
klp-6NP_498069.1 KISc_KIF1A_KIF1B 5..365 CDD:276816 184/367 (50%)
KISc 6..365 CDD:214526 183/366 (50%)
FliJ 365..448 CDD:280262 23/93 (25%)
FHA 449..549 CDD:238017 32/106 (30%)
KIF1B 659..699 CDD:289208 13/43 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D76316at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100247
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

Return to query results.
Submit another query.