DRSC/TRiP Functional Genomics Resources

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Protein Alignment Khc-73 and Kif3b

DIOPT Version :10

Sequence 1:NP_001261000.1 Gene:Khc-73 / 36718 FlyBaseID:FBgn0019968 Length:1957 Species:Drosophila melanogaster
Sequence 2:NP_032470.3 Gene:Kif3b / 16569 MGIID:107688 Length:747 Species:Mus musculus


Alignment Length:900 Identity:247/900 - (27%)
Similarity:402/900 - (44%) Gaps:221/900 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 ASDKIKVAVRVRPFNRRE--IELDTKCIVEMEKQQTILQNPPPLEKIERKQPKTFAFDHCFYSLN 64
            :|:.::|.||.||.|.:|  ...|....|:::..|..::||   :....:.||||.|| ..|..|
Mouse     6 SSESVRVVVRCRPMNGKEKAASYDKVVDVDVKLGQVSVKNP---KGTSHEMPKTFTFD-AVYDWN 66

  Fly    65 PEDENFASQETVFDCVGRGILDNAFQGYNACIFAYGQTGSGKSYTMMGTQ---ESKGIIPRLCDQ 126
                  |.|..::|...|.::|:..||:|..||||||||:||:|||.|.:   |.:|:||...|.
Mouse    67 ------AKQFELYDETFRPLVDSVLQGFNGTIFAYGQTGTGKTYTMEGVRGDPEKRGVIPNSFDH 125

  Fly   127 LFSAIANKSTPELMYKVEVSYMEIYNEKVHDLLDPKPNKQSLKVREHNVMGPYVDGLSQLAVTSY 191
            :|:.|:.....:  |.|..||:|||.|::.|||. |...:.|:::|....|.||..||.....|.
Mouse   126 IFTHISRSQNQQ--YLVRASYLEIYQEEIRDLLS-KDQTKRLELKERPDTGVYVKDLSSFVTKSV 187

  Fly   192 QDIDNLMTEGNKSRTVAATNMNAESSRSHAVFSVVLTQILTDQATGVSGE---KVSRMSLVDLAG 253
            ::|:::|..||::|:|.|||||..||||||:|  |:|  :.....|:.||   :|.:::||||||
Mouse   188 KEIEHVMNVGNQNRSVGATNMNEHSSRSHAIF--VIT--IECSEVGLDGENHIRVGKLNLVDLAG 248

  Fly   254 SERAVKTGAVGDRLKEGSNINKSLTTLGLVISKLADQSNGKKSGNDKFVPYRDSVLTWLLKDNLG 318
            |||..||||.|:||||.:.||.||:.||.|||.|.|       |....:|||||.||.||:|:||
Mouse   249 SERQAKTGAQGERLKEATKINLSLSALGNVISALVD-------GKSTHIPYRDSKLTRLLQDSLG 306

  Fly   319 GNSRTVMVATISPSADNYEETLSTLRYADRAKRIVNHAVVNEDPNARIIRELRHEVETLRSML-- 381
            ||::|||||.:.|::.|.||||:|||||:|||.|.|...|||||...::||.:.|:..|::.|  
Mouse   307 GNAKTVMVANVGPASYNVEETLTTLRYANRAKNIKNKPRVNEDPKDALLREFQEEIARLKAQLEK 371

  Fly   382 ------------KHATGSPVG--DVQDKLAESENLMKQISQTWEEKLVKTERIQNERQQALEKMG 432
                        :...||..|  :.:::..|.|.........|.|   :.|:::.|::..:|...
Mouse   372 RSIGRRKRREKRREGGGSGGGGEEEEEEGEEGEEDGDDKDDYWRE---QQEKLEIEKRAIVEDHS 433

  Fly   433 ISVQASGIKVEKNKYYLVNLNADPSLNELL---VYYLKDRTLIGGRTISGQQPDIQLSGLGIQPE 494
            :..:.....:::.:..:.:|..:....|:|   :..::.:.|:||:.|                 
Mouse   434 LVAEEKMRLLKEKEKKMEDLRREKDAAEMLGAKIKAMESKLLVGGKNI----------------- 481

  Fly   495 HCVITIEDSGLYMEPVQGARCFVNGSAAVEKTPLQNGDRILWGNHHFFRVNSPKSNNTSMCASEP 559
                                        |:.|                              :|.
Mouse   482 ----------------------------VDHT------------------------------NEQ 488

  Fly   560 QTPAQLIDYNFARDEIMQNELSNDPIQTAIARLERQHEEDKQVALEKQRQEYERQFQQLRNILSP 624
            |   ::::..  |.||.:.:.....||..:...:.:..|.|:.....| ||.:.:.::|:.:.| 
Mouse   489 Q---KILEQK--RQEIAEQKRREREIQQQMESRDEETLELKETYTSLQ-QEVDIKTKKLKKLFS- 546

  Fly   625 STPYAPYAPYDPLRMGKITPNTPTSQMRVEKWAQERDEMFRRSLGQLKTDIMRANSLVQEANFLA 689
                         ::..:.......|   |:..:||.|: .::..:|..::...:.:::  ||: 
Mouse   547 -------------KLQAVKAEIHDLQ---EEHIKERQEL-EQTQNELTRELKLKHLIIE--NFI- 591

  Fly   690 EEMEKKTKFSVTLQIPPANLSPNRRRGAFVSEPAILVKRTNSGSQIWTME---KLENKLIDMREM 751
             .:|:|.|.              ..|..|..|           ...|.:.   :|||:.:..|.:
Mouse   592 -PLEEKNKI--------------MNRSFFDDE-----------EDHWKLHPITRLENQQMMKRPV 630

  Fly   752 YQEHKERVLNGLDEDNAKPQ-----DPFYESQENHNLIGVANIFLEVLFHDVKL--DYHTPIISQ 809
            .....:|.|:    .:|:..     :|.|.::         ||.|..|....:.  ||..|.||.
Mouse   631 SAVGYKRPLS----QHARMSMMIRPEPRYRAE---------NIMLLELDMPSRTTRDYEGPAISP 682

  Fly   810 QGEVA--------GRLQVE---IERIAGQMPQ-----DRMCESVSESSGDSRDEY 848
            :.:.|        ..:||:   .|..|.:.|:     .|...|.|.|||:...::
Mouse   683 KVQAALDAALQDEDEIQVDASSFESTASRKPKARPKSGRKSGSSSSSSGNPASQF 737

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Khc-73NP_001261000.1 KISc_KIF1A_KIF1B 4..359 CDD:276816 158/362 (44%)
Kinesin_assoc 356..468 CDD:465047 23/130 (18%)
FHA_KIF13 446..547 CDD:438758 9/103 (9%)
KIF1B 741..786 CDD:463574 9/49 (18%)
DUF3694 989..1243 CDD:463599
CAP_GLY 1785..1850 CDD:460154
Kif3bNP_032470.3 KISc_KIF3 8..340 CDD:276822 156/355 (44%)
Smc <355..>581 CDD:440809 44/327 (13%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 374..412 5/37 (14%)
Globular 580..747 39/199 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 698..747 11/39 (28%)
Blue background indicates that the domain is not in the aligned region.

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