DRSC/TRiP Functional Genomics Resources

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Protein Alignment Khc-73 and Kif1c

DIOPT Version :9

Sequence 1:NP_001261000.1 Gene:Khc-73 / 36718 FlyBaseID:FBgn0019968 Length:1957 Species:Drosophila melanogaster
Sequence 2:XP_036012244.1 Gene:Kif1c / 16562 MGIID:1098260 Length:1112 Species:Mus musculus


Alignment Length:1294 Identity:434/1294 - (33%)
Similarity:591/1294 - (45%) Gaps:407/1294 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MASDKIKVAVRVRPFNRREIELDTKCIVEMEKQQTILQNPPPLEKIERKQPKTFAFDHCFYS-LN 64
            ||...:||||||||||.||...|.||:|.|:...|.:.||    |..:..||:|.||:.::| .:
Mouse     1 MAGASVKVAVRVRPFNARETSQDAKCVVSMQGNTTSIINP----KQSKDAPKSFTFDYSYWSHTS 61

  Fly    65 PEDENFASQETVFDCVGRGILDNAFQGYNACIFAYGQTGSGKSYTMMGTQE--SKGIIPRLCDQL 127
            .||..||||:.|:..:|..:|.:||:|||.|||||||||:||||||||.||  .:||:|:||:.|
Mouse    62 VEDPQFASQQQVYRDIGEEMLLHAFEGYNVCIFAYGQTGAGKSYTMMGRQEPGQQGIVPQLCEDL 126

  Fly   128 FSAIANKSTPELMYKVEVSYMEIYNEKVHDLLDPKPNKQSLKVREHNVMGPYVDGLSQLAVTSYQ 192
            ||.:....:.:|.|.|||||||||.|:|.|||:|| ::.||:||||.::||||..||:||||||.
Mouse   127 FSRVNVNQSAQLSYSVEVSYMEIYCERVRDLLNPK-SRGSLRVREHPILGPYVQDLSKLAVTSYA 190

  Fly   193 DIDNLMTEGNKSRTVAATNMNAESSRSHAVFSVVLTQILTDQATGVSGEKVSRMSLVDLAGSERA 257
            ||.:||..|||:|||||||||..||||||||::|.||...||.||:..||||::|||||||||||
Mouse   191 DIADLMDCGNKARTVAATNMNETSSRSHAVFTIVFTQRSHDQLTGLDSEKVSKISLVDLAGSERA 255

  Fly   258 VKTGAVGDRLKEGSNINKSLTTLGLVISKLAD-QSNGKKSGNDKFVPYRDSVLTWLLKDNLGGNS 321
            ..:||.|.|||||:||||||||||.|||.||| ||..:||   .|:||||||||||||:||||||
Mouse   256 DSSGARGMRLKEGANINKSLTTLGKVISALADLQSKKRKS---DFIPYRDSVLTWLLKENLGGNS 317

  Fly   322 RTVMVATISPSADNYEETLSTLRYADRAKRIVNHAVVNEDPNARIIRELRHEVETLRSM------ 380
            ||.|:|.:||:..||||||||||||||.|:|..:||:|||||||:||||:.||..||.:      
Mouse   318 RTAMIAALSPADINYEETLSTLRYADRTKQIRCNAVINEDPNARLIRELQEEVARLRDLLMAQGL 382

  Fly   381 -------LKHATGSPVG---------------------------------------DVQDKLAES 399
                   ||...|||.|                                       :..::|.|:
Mouse   383 SASALGGLKVEEGSPGGVLPPASSPPAPASPSSPPPHNGELEPSFSPSAEPQIGPEEAMERLQET 447

  Fly   400 ENLMKQISQTWEEKLVKTERIQNERQQALEKMGISVQASGIKV----EKNKYYLVNLNADPSLNE 460
            |.::.::::||||||.|||.::.||:..|.:||::|:..|..|    .|...:|||||.||.::|
Mouse   448 EKIIAELNETWEEKLRKTEALRMEREALLAEMGVAVREDGGTVGVFSPKKTPHLVNLNEDPLMSE 512

  Fly   461 LLVYYLKDRTLIGGRTISGQ-QPDIQLSGLGIQPEHCVITI--EDSG---LYMEPVQGARCFVNG 519
            .|:|::||     |.|..|| ..||:|:|..|:.:||:...  :..|   :.:||.:||..:|||
Mouse   513 CLLYHIKD-----GVTRVGQVDVDIKLTGQFIREQHCLFRSIPQPDGEVMVTLEPCEGAETYVNG 572

  Fly   520 SAAVEKTPLQNGDRILWGNHHFFRVNSPKSNNTSM---CASEPQTPAQLIDYNFARDEIMQNELS 581
            ....|...|::|:||:.|.:|.||.|.|:......   ....|..|::.:|:|||:.|:::.:..
Mouse   573 KLVTEPLVLKSGNRIVMGKNHVFRFNHPEQARLERERGVPPPPGPPSEPVDWNFAQKELLEQQGI 637

  Fly   582 NDPI--QTAIARLERQHEEDKQVA---LEKQRQEYERQFQQLRNILSPSTPYAPYAPYDPLRMGK 641
            :..:  :..:..||.|:.::|:.|   ||:||        .:|:...|:.| ..||..|      
Mouse   638 DIKLEMEKRLQDLENQYRKEKEEADLLLEQQR--------LVRDTWGPTEP-GQYADSD------ 687

  Fly   642 ITPNTPTSQMR--VEKWAQERDEMFRRSLGQLKTDIMRANSLVQEANFLAEEMEKKTKFSVTLQI 704
               :...|..|  .|.|                    |..|.::|                  |:
Mouse   688 ---SGEDSDKRSCEESW--------------------RLISSLRE------------------QL 711

  Fly   705 PPANLSPNRRRGAFVSEPAILVKRTNSGSQIWTMEKLENKLIDMREMYQEHKERVLNGLDEDNAK 769
            ||..:..             :|||....|        ..|....|.:||..:.|.|.|       
Mouse   712 PPTTVQN-------------IVKRCGLPS--------SGKRRAPRRVYQIPQRRRLQG------- 748

  Fly   770 PQDPFYESQENHNLIGVANIFLEVLFHDVKLDYHTPIISQQGEVAGRLQVEIERIAGQMPQDRMC 834
             :||.:.:..:..:..|..|..||...|.:   |           ||  .|||.:|. :....:|
Mouse   749 -KDPRWATMADLKMQAVKEICYEVALADFR---H-----------GR--AEIEALAA-LKMRELC 795

  Fly   835 ESVS--ESSGD-----SRDEYDDPVDPTSNQITCRVTIKCASGLPLSLSNFVFCQYTFWGHQEMV 892
            .:..  |..||     :||.:|                                           
Mouse   796 RTYGKPEGPGDAWRAVARDVWD------------------------------------------- 817

  Fly   893 VPVINAESTAHDQNMVFKFEHTQDFTVTINEEFLEHC-------IEGALSIEVWGHRSAGFSKTK 950
                                       |:.||  |.|       .|||...||...| |...|..
Mouse   818 ---------------------------TVGEE--EGCGGGGGGSEEGARGAEVEDLR-AHIDKLT 852

  Fly   951 G--WEVEQQQA----KARSLVDRWAELSRKIELWVEIHELNDNG---EYSP------VEVTNRNE 1000
            |  .||:.|.:    :.::|.||...:.|.|.|..::.:.||..   .::|      ||.|..|:
Mouse   853 GILQEVKLQNSSKDRELQALRDRMLRMERVIPLTQDLEDDNDESGLVTWAPPEGPEAVEETVPND 917

  Fly  1001 VLTGGIYQLRQGQQRRVNVRVKPVQNSGTLPIICQSIVNVAIGSVTVRSRLQRPLDSYQ------ 1059
                            .:..|:|     |.|                      ||.|::      
Mouse   918 ----------------HSPAVRP-----TSP----------------------PLSSWERVSRLM 939

  Fly  1060 EEDLTVLREKWSEALGRRRQYLDQQIQM---------------------------LIKKEEKNEQ 1097
            |||....|       ||.|....:|:::                           |....:.|.|
Mouse   940 EEDPAFRR-------GRLRWLKQEQLRLQGLQGAGGRGGGLRRPPARFVPPHDCKLRFPFKSNPQ 997

  Fly  1098 ERERELSLVHQWVSLTEERNAVLVPAPGSG------------IPGAPASWEPPSGMEPH 1144
            .||       .|            |..|||            :|.||.:..|||...||
Mouse   998 HRE-------SW------------PGMGSGEAPAPQPPEEVTVPPAPPNRRPPSPRRPH 1037

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Khc-73NP_001261000.1 KISc_KIF1A_KIF1B 4..359 CDD:276816 221/358 (62%)
KISc 6..359 CDD:214526 221/356 (62%)
Kinesin_assoc 356..468 CDD:292801 54/167 (32%)
FHA 446..546 CDD:238017 40/105 (38%)
KIF1B 741..786 CDD:289208 9/44 (20%)
DUF3694 <1196..1252 CDD:289256
CAP_GLY 1786..1850 CDD:279625
Kif1cXP_036012244.1 KISc_KIF1A_KIF1B 4..355 CDD:276816 221/358 (62%)
Kinesin_assoc 352..522 CDD:406567 56/174 (32%)
FHA 499..599 CDD:238017 40/104 (38%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D76316at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100247
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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