DRSC/TRiP Functional Genomics Resources

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Protein Alignment Khc-73 and kif18b

DIOPT Version :9

Sequence 1:NP_001261000.1 Gene:Khc-73 / 36718 FlyBaseID:FBgn0019968 Length:1957 Species:Drosophila melanogaster
Sequence 2:XP_002939283.3 Gene:kif18b / 100490953 XenbaseID:XB-GENE-5960389 Length:872 Species:Xenopus tropicalis


Alignment Length:969 Identity:264/969 - (27%)
Similarity:410/969 - (42%) Gaps:243/969 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 IKVAVRVRPFNRREIELDTKCIVEMEKQQTILQNPPPLE--------------KIERKQPKTFAF 56
            :.|.|||||.|:||.|.:...:|::.....::.:|...|              |.:.|..| |.|
 Frog    13 VSVVVRVRPPNQREQEGNHHAVVQVVDHNMLVFDPDEPETTGVFSSLRGNDGPKRKGKDMK-FIF 76

  Fly    57 DHCFYSLNPEDENFASQETVFDCVGRGILDNAFQGYNACIFAYGQTGSGKSYTMMGTQESKGIIP 121
            |..|      .|| :.|:.||:...:.|||....|||..:||||.||:||::||:|::...|::.
 Frog    77 DRIF------GEN-SRQQDVFEHTTKEILDGVLNGYNCSVFAYGATGAGKTHTMLGSEADPGVMY 134

  Fly   122 RLCDQLF---SAIANKSTPELMYKVEVSYMEIYNEKVHDLLDPKPNKQSLKVREHNVMGPYVDGL 183
            ....:|:   .||..:.:.|::    :||:|:|||::.|||:|   :.||.:||....|..|.||
 Frog   135 LTMVELYRRIEAIKEEKSCEVL----ISYLEVYNEQIQDLLEP---RGSLAIREDPQKGVVVQGL 192

  Fly   184 SQLAVTSYQDIDNLMTEGNKSRTVAATNMNAESSRSHAVFSVVLTQILTDQATGVSGE-KVSRMS 247
            |.....|...:..::..||.:||...|:.||.||.|||||.:.:.|  .|:...:|.: :|::||
 Frog   193 SFHQPKSADQLLQMLASGNLNRTQHPTDANASSSHSHAVFQIYVKQ--QDRTVSISQDVRVAKMS 255

  Fly   248 LVDLAGSERAVKTGAVGDRLKEGSNINKSLTTLGLVISKLADQSNGKKSGNDKFVPYRDSVLTWL 312
            |:||||||||..|.|.|:||:||:|||:||..|..||:.||| :..||:    .:|||||.||.|
 Frog   256 LIDLAGSERASTTNAKGERLREGANINRSLLALINVINALAD-AKSKKA----HIPYRDSKLTRL 315

  Fly   313 LKDNLGGNSRTVMVATISPSADNYEETLSTLRYADRAKRI---VNHAVVNEDPN----ARIIREL 370
            |||::|||.||||:|.|||||.:|::|.:||:||:|||.|   :...|:|.|.:    |.:..||
 Frog   316 LKDSIGGNCRTVMIAAISPSALSYDDTYNTLKYANRAKEIKLSMKSNVINLDCHISKYAAVCEEL 380

  Fly   371 RHEVETLRSMLK--HATGSPVGDVQDKLAESENLMKQISQTWEEK-------------LVKTERI 420
            :.||..||..|:  .....|..|..|     .:|..:.|...||.             |:.|...
 Frog   381 KAEVAELREKLRFYEMKEQPDDDTSD-----NSLQDKTSPRREEHSDLGSPEQGSGALLLSTSSC 440

  Fly   421 QNERQQALE-------KMGISVQASGIKVEKNKYYLVNLNADPSLNELLVYYLKDRTLIGGRTIS 478
            |::..:..|       ::.::......::|||          |.|:|.|.....:|.:.......
 Frog   441 QSQDHKPAEMNPRKWDQVPLNCSLGREELEKN----------PCLHEALKDDAAERLVTSLLNFV 495

  Fly   479 GQQPDI-QLSGLGIQPEHCVITIEDSGLYME--PVQGARCFVNGSAAVEKTPLQNGDRILWGNHH 540
            .:|.:| :|:|| ..||     :||....:|  .::|.:      |..||...:.          
 Frog   496 RKQCEILKLAGL-YTPE-----LEDELRQLEGLALRGQK------ATAEKVTEKE---------- 538

  Fly   541 FFRVNSPKSNNTSMCASE-PQTPAQLIDYNFARDEI--MQNELSNDPIQTAIARLERQHEEDKQV 602
              :|.......|.....| ||||       ...|.:  ::.|:..||:..|..|           
 Frog   539 --QVTEEHEMETHKEQEEVPQTP-------LVEDVVFDIKEEVIEDPVPPARKR----------- 583

  Fly   603 ALEKQRQEYERQFQQLRNILSPSTPYAPYAPYDPLRMGKITPNTPT--------SQMRVEKWAQE 659
               |..:.|.      .:||..::| :..:|..|::..:...||||        |...|:.....
 Frog   584 ---KPGKRYR------ADILPDNSP-SLRSPIVPVKRRREATNTPTKARLAGVPSTPEVQVKRPR 638

  Fly   660 RDEMFRRSLGQLKTDIMRANSLVQEANFLAE--------------EMEKKTKFSVTL-------- 702
            :..:..|....|::.:   |.|...|..:|.              :.:..||..:.|        
 Frog   639 KSSIPSRCRVSLRSSL---NLLPSNAKDIASQPPSLCTPKQTAKIQSQTVTKSRMPLGTSAIQNC 700

  Fly   703 -QIPPANLSPN--------RRRGAFVSE------------------PAILVKRT---NSGSQIWT 737
             .:|.|.|:|.        ...|.||||                  |...:..|   :|...:::
 Frog   701 ASVPAAALAPRDMNTTFDLSEEGCFVSEMDKTVTFGTSDFPGWENVPIHNIDTTFGKSSDVAVFS 765

  Fly   738 MEKLE------NKLIDMREMYQEHKERVLNGLDEDNAKPQDPFYESQENHNLIGVANI----FLE 792
            ::.|.      |::....:.| .||.|                ..|..:.:..|...:    ...
 Frog   766 VKGLSVNHMNANQMTSAAKSY-SHKRR----------------RSSSSSMSRAGKGTLAQSRIAR 813

  Fly   793 VLFHDVKLDYHTPIIS---------QQGEVAGRLQVEIERIAGQMPQDRMCE--SVSES 840
            :....||.....|.||         |.|:..|:..|...|....:|..|..:  :||:|
 Frog   814 LQMSTVKKSQQPPTISESICSSPRGQSGKKTGKGTVAFGRSLAAVPVTRFTQYSTVSKS 872

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Khc-73NP_001261000.1 KISc_KIF1A_KIF1B 4..359 CDD:276816 151/373 (40%)
KISc 6..359 CDD:214526 151/373 (40%)
Kinesin_assoc 356..468 CDD:292801 29/137 (21%)
FHA 446..546 CDD:238017 20/102 (20%)
KIF1B 741..786 CDD:289208 7/50 (14%)
DUF3694 <1196..1252 CDD:289256
CAP_GLY 1786..1850 CDD:279625
kif18bXP_002939283.3 KISc_KIP3_like 23..355 CDD:276821 143/353 (41%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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