DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgant1 and Galnt5

DIOPT Version :9

Sequence 1:NP_611043.1 Gene:Pgant1 / 36717 FlyBaseID:FBgn0034025 Length:601 Species:Drosophila melanogaster
Sequence 2:NP_113984.1 Gene:Galnt5 / 83627 RGDID:620361 Length:930 Species:Rattus norvegicus


Alignment Length:605 Identity:215/605 - (35%)
Similarity:318/605 - (52%) Gaps:84/605 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 PVAPLVRAAALRGHGRERFEAYSDSENEIARPAT-----------QSP-YEQIIQLDLQKQKVGL 90
            |:||  :.|..:.......|.::...|..|:..|           ::| ...::::|:......|
  Rat   363 PLAP--KRAVSQSKPTLAEELHTARSNLTAKATTVGHQQSHANISENPGKHHVLRIDVTLSPRDL 425

  Fly    91 ---GEQGVAVHLSGAAKERGDEIYKKIALNEELSEQLTYNRSVGDHRNPLCAKQRFDSDSLPTAS 152
               |:.|..|.:....|:..::.:|:...|..||:.:..:|::.|.|...||:|...:| |||.|
  Rat   426 NAPGQFGRPVVVPPGKKKEAEQRWKEGNFNVYLSDLIPVDRAIEDTRPAGCAEQLVHND-LPTTS 489

  Fly   153 VVIIFFNEPYSVLLRTVHSTLSTCNEKALKEIILVDDGSDNVELGAKLDYYVRTRIPSGKVTILR 217
            :::.|.:|.:|.|||:|||.|:......:|||:||||.|....|.|.||.|: ::.|  ||.|||
  Rat   490 IIMCFVDEVWSALLRSVHSVLNRSPPHLIKEILLVDDFSTKDYLKANLDKYM-SQFP--KVRILR 551

  Fly   218 LKNRLGLIRARLAGARIATGDVLIFLDAHCEGNIGWCEPLLQRIKESRTSVLVPIIDVIDANDFQ 282
            ||.|.||||||||||:.||||||.|||:|.|.|:||.||||:|:..:|..|..|:|:||:..|..
  Rat   552 LKERHGLIRARLAGAQNATGDVLTFLDSHVECNVGWLEPLLERVYLNRKKVACPVIEVINDKDMS 616

  Fly   283 YSTNGYKSFQVGGFQWNGHFDWINLP------EREKQRQRRECKQEREICPAYSPTMAGGLFAID 341
            |.|  ..:||.|.|.|..:|.|..:|      ...|:.....|           |.||||||:||
  Rat   617 YMT--VDNFQRGVFTWPMNFGWRTIPPDVIAKNGIKETDIIRC-----------PVMAGGLFSID 668

  Fly   342 RRYFWEVGSYDEQMDGWGGENLEMSFRIWQCGGTIETIPCSRVGHIFRDFHPYKFPNDR-DTHGI 405
            :.||:|:|:||..:|.|||||:|:||::|.|||.||.|||||||||||:.:||.||.|| .|...
  Rat   669 KSYFYELGTYDPGLDVWGGENMELSFKVWMCGGEIEIIPCSRVGHIFRNDNPYSFPKDRMKTVER 733

  Fly   406 NTARMALVWMDEYINIFFLNRPDLKFHA-DIGDVTHRVMLRKKLRCKSFEWYLKNIYPEKFVPTK 469
            |..|:|.||:|||..:|:.:...|.... |:|::|.:..|||||:|:||:|||.|::|:...|..
  Rat   734 NLVRVAEVWLDEYKELFYGHGDHLIDQGLDVGNLTQQRELRKKLKCQSFKWYLDNVFPDLKAPVV 798

  Fly   470 DVQG------WGK-VHAVNSNICLDDLLQNNEKPYNAGLYPCGKVLQKSQLFSFTNTNVLRN-EL 526
            ...|      .|| |...|..:.|:|...::|                .|.|::|...:::: |.
  Rat   799 RASGVFINLALGKCVSIKNITVVLEDCDGSSE----------------LQQFNYTWVRLIKHGEW 847

  Fly   527 SCATVQHSESPPYRVVMVPCMENDEFNEQWRYEHQ-----------HIIHSNTGMCLDHQGLKSL 580
            ..|.:....|    :.:.||   |..|.:.::.|:           ||:..:....|..:|..|.
  Rat   848 CVAPIPDKGS----LTLYPC---DNRNNRLKWLHRSASAFHPELVDHIVFESYQQLLCMEGNFSQ 905

  Fly   581 DDAQVAPCDPHSESQRWTIE 600
            ...::|.|:|....|:|..|
  Rat   906 KTLKLAACNPTEPQQKWKFE 925

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant1NP_611043.1 WcaA 147..426 CDD:223539 141/285 (49%)
pp-GalNAc-T 152..461 CDD:133004 154/316 (49%)
Ricin_B_lectin 474..597 CDD:279046 27/135 (20%)
RICIN 481..599 CDD:238092 25/129 (19%)
Galnt5NP_113984.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 163..210
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 344..377 4/15 (27%)
WcaA 484..>599 CDD:223539 66/118 (56%)
Catalytic subdomain A 485..594 64/111 (58%)
pp-GalNAc-T 489..790 CDD:133004 154/316 (49%)
Catalytic subdomain B 654..716 40/72 (56%)
RICIN 804..925 CDD:214672 28/143 (20%)
RICIN 810..924 CDD:238092 28/136 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3736
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D606683at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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