DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgant1 and galnt16

DIOPT Version :9

Sequence 1:NP_611043.1 Gene:Pgant1 / 36717 FlyBaseID:FBgn0034025 Length:601 Species:Drosophila melanogaster
Sequence 2:XP_001339749.3 Gene:galnt16 / 799387 ZFINID:ZDB-GENE-131120-189 Length:567 Species:Danio rerio


Alignment Length:609 Identity:208/609 - (34%)
Similarity:316/609 - (51%) Gaps:60/609 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MLPRFRSFYGKLIIFILVALCFILYSKVQQNGSPEEPPVAPLVRAAALRG--HGRE----RFEAY 59
            |:.|.|:   ..|:.:.||.....:..:.|:..|.....:....:|..:.  ||::    |.|  
Zfish     1 MMRRIRA---NAILILTVAWILGTFYYLWQDSKPSASSSSSSSSSAGSQQKIHGQKSSSGRLE-- 60

  Fly    60 SDSENEIARPATQSPYEQIIQLDLQKQKVGLGEQGVAVHLSGAAKERGDEIYKKIALNEELSEQL 124
               |..:....|::|     ||:.|.|.:||.::  ...||......|::.|::.|.|.:.|::|
Zfish    61 ---ERTLPLIVTRAP-----QLEQQGQLLGLFDE--KAFLSSKQLRPGEDPYREHAFNLQESDRL 115

  Fly   125 TYNRSVGDHRNPLCAKQRFDSDSLPTASVVIIFFNEPYSVLLRTVHSTLSTCNEKALKEIILVDD 189
            ...|::.|.|:..||...||.| ||..|::|.|.||..|.||||:.|.|.......:.|||||||
Zfish   116 GSERAIRDTRHYRCASMTFDPD-LPPTSIIITFHNEARSTLLRTIKSVLMRSPPHLILEIILVDD 179

  Fly   190 GSDNVELGAKLDYYVRTRIPSGKVTILRLKNRLGLIRARLAGARIATGDVLIFLDAHCEGNIGWC 254
            .|.:.|     |..:.::||  ||..||.:.|.||||:|:.||..|:..:|.|||:|||.|..|.
Zfish   180 FSSDPE-----DCRLLSQIP--KVRCLRNERREGLIRSRVRGASAASASILTFLDSHCEVNTDWL 237

  Fly   255 EPLLQRIKESRTSVLVPIIDVIDANDFQYSTNGYKSFQV-GGFQWNGHFDWINLPEREKQRQRRE 318
            :|::||:||..:.|:.||||||..::|.|..   .|..: |||.|:.||.|..:|..:|. .|.:
Zfish   238 QPMIQRVKEDHSRVVSPIIDVISLDNFAYLA---ASADLRGGFDWSLHFKWEQIPIEQKM-ARND 298

  Fly   319 CKQEREICPAYSPTMAGGLFAIDRRYFWEVGSYDEQMDGWGGENLEMSFRIWQCGGTIETIPCSR 383
            ..|     |..:|.:|||:|.|::.:|..:|.||..||.|||||.|:|||:|.|||::|.:||||
Zfish   299 PTQ-----PIRTPVIAGGIFVIEKGWFNHLGQYDTHMDIWGGENFELSFRVWMCGGSLEILPCSR 358

  Fly   384 VGHIFRDFHPYKFPNDRD-THGINTARMALVWMDEYINIFFLNRPDLKFHADIGDVTHRVMLRKK 447
            |||:||..|||.||.... |:..||.|.|.||||:|...::..||..:..| .|.:..|:.|::|
Zfish   359 VGHVFRKRHPYDFPEGNALTYIKNTRRAAEVWMDDYKQYYYAARPSAQGKA-FGSIADRLALKRK 422

  Fly   448 LRCKSFEWYLKNIYPEKFVPTKDVQGWGKVHAV--NSNICLDDLLQNNEKPYNAGLYPCGKV--L 508
            |.|.||.|||:|:|||..:|.::     :.:::  ...:||:     :....:.||..|...  :
Zfish   423 LNCNSFRWYLENVYPELKIPEQE-----EAYSLLKQGGLCLE-----SHGTDSLGLAECRSTPSI 477

  Fly   509 QKSQLFSFTNTNVLRNELSCATVQHSESPPYRVVMVPCMENDEFNEQWRYEHQHIIHSNTGMCLD 573
            ..||.::.....:.:::|..|....:...  :|.:.|| ...|..::|:.....:.|..:|:|||
Zfish   478 PASQKWTLIEPQIRQHDLCLAITAFTAGS--KVRLEPC-NIKESRQKWKPRGPALQHMISGLCLD 539

  Fly   574 HQGLKSLDDAQVAPCDPHSESQRW 597
            .|  .......:|.|.|...||.|
Zfish   540 SQ--PPSGPPAIAQCRPQVASQSW 561

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant1NP_611043.1 WcaA 147..426 CDD:223539 125/280 (45%)
pp-GalNAc-T 152..461 CDD:133004 138/310 (45%)
Ricin_B_lectin 474..597 CDD:279046 25/126 (20%)
RICIN 481..599 CDD:238092 26/119 (22%)
galnt16XP_001339749.3 Glyco_tranf_2_3 139..365 CDD:290369 108/241 (45%)
pp-GalNAc-T 142..436 CDD:133004 138/310 (45%)
Ricin_B_lectin 452..561 CDD:279046 25/118 (21%)
RICIN 455..562 CDD:238092 26/117 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3736
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D606683at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.820

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