DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pgant1 and Galntl5

DIOPT Version :9

Sequence 1:NP_611043.1 Gene:Pgant1 / 36717 FlyBaseID:FBgn0034025 Length:601 Species:Drosophila melanogaster
Sequence 2:NP_080725.2 Gene:Galntl5 / 67909 MGIID:1915159 Length:431 Species:Mus musculus


Alignment Length:352 Identity:152/352 - (43%)
Similarity:209/352 - (59%) Gaps:14/352 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly   112 KKIALNEELSEQLTYNRSVGDHRNPLCAKQRFDSDSLPTASVVIIFFNEPYSVLLRTVHSTLSTC 176
            ::..||..:|.:|...|.|.|.|:.:|.::.:.. :|||||::|.|:||.::.|||.|.|.::..
Mouse    79 RRYGLNAIMSRRLGIEREVPDSRDKICQQKHYPF-NLPTASIIICFYNEEFNTLLRAVSSVVNLS 142

  Fly   177 NEKALKEIILVDDGSDNVELGAKLDYYVRTRIPSGKVTILRLKNRLGLIRARLAGARIATGDVLI 241
            .:..|:|||||||.|:..:|..|||||:  .|..|||.::|.|.|.||||:::.||..|:||:|:
Mouse   143 PQHLLEEIILVDDMSEFDDLKDKLDYYL--EIFRGKVKLIRNKKREGLIRSKMIGASRASGDILV 205

  Fly   242 FLDAHCEGNIGWCEPLLQRIKESRTSVLVPIIDVIDANDFQYSTNGYKSFQVGGFQWNGHFDWIN 306
            |||:|||.|..|.||||..|.:....|:.||||||:.....|..   .....|.|.||.:..|.|
Mouse   206 FLDSHCEVNRVWLEPLLHAIAKDHKMVVCPIIDVINELTLDYMA---APIVRGAFDWNLNLRWDN 267

  Fly   307 LPEREKQRQRRECKQEREICPAYSPTMAGGLFAIDRRYFWEVGSYDEQMDGWGGENLEMSFRIWQ 371
            :...|..      ..|....|..||.|.||:|||:|.||.|:|.||..||..||||:|:|.|||.
Mouse   268 VFAYELD------GPEGPSTPIRSPAMTGGIFAINRHYFNELGQYDNGMDICGGENVELSLRIWM 326

  Fly   372 CGGTIETIPCSRVGHIFRDFHPYKFPNDRDTHGINTARMALVWMDEYINIFFLNRPDLKFHADIG 436
            |||.:..:||||||:..:....::..| :.....|..|:..||:|||...|||.||.|.: ...|
Mouse   327 CGGQLFILPCSRVGYNSKALSQHRRAN-QSALSRNLLRVVHVWLDEYKGNFFLQRPSLTY-VSCG 389

  Fly   437 DVTHRVMLRKKLRCKSFEWYLKNIYPE 463
            :::.||.|||:|.||||:|||.||:||
Mouse   390 NISERVELRKRLGCKSFQWYLDNIFPE 416

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant1NP_611043.1 WcaA 147..426 CDD:223539 122/278 (44%)
pp-GalNAc-T 152..461 CDD:133004 136/308 (44%)
Ricin_B_lectin 474..597 CDD:279046
RICIN 481..599 CDD:238092
Galntl5NP_080725.2 Catalytic subdomain A 114..224 58/111 (52%)
pp-GalNAc-T 118..414 CDD:133004 136/308 (44%)
Glyco_tranf_2_2 118..380 CDD:287123 118/273 (43%)
Catalytic subdomain B 282..344 36/61 (59%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3736
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D606683at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

Return to query results.
Submit another query.