DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgant1 and galnt12

DIOPT Version :9

Sequence 1:NP_611043.1 Gene:Pgant1 / 36717 FlyBaseID:FBgn0034025 Length:601 Species:Drosophila melanogaster
Sequence 2:XP_688194.1 Gene:galnt12 / 559736 ZFINID:ZDB-GENE-060503-704 Length:578 Species:Danio rerio


Alignment Length:632 Identity:239/632 - (37%)
Similarity:334/632 - (52%) Gaps:98/632 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 RFRSFYGKLIIFILVALCFILYSKVQQNGSPEEPPVAPLVRAAALRGHGRERFEAYSD-SENEIA 67
            |.||   |.|::|:.|  |::...|....:..:..:|.:          ||..:.:.: .|..:.
Zfish     7 RSRS---KFILYIVGA--FVVGYLVFHRNTQSDVGLAKI----------REVPDEHKNVDEQFLK 56

  Fly    68 RPATQSPYEQIIQLDLQKQKVGLGEQGVAV--HLSGAAKERGDEIYKKIALNEELSEQLTYNRSV 130
            ||..:.|     .||:.    .|||.|.||  .|||..|...:|..||..:|..:|::::.:|.:
Zfish    57 RPVYEKP-----ALDVN----ALGEMGRAVKLDLSGEEKREEEESIKKHQINTYVSDRISLHRRL 112

  Fly   131 GDHRNPLCAKQRFDSDSLPTASVVIIFFNEPYSVLLRTVHSTLSTCNEKALKEIILVDDGSDNVE 195
            .:..||||...::|..||||.||||.|:||.:|.|||||||.|.|..:..|.|:|||||.||...
Zfish   113 AERWNPLCRNLKYDYLSLPTTSVVIAFYNEAWSTLLRTVHSVLETSPDLLLNEVILVDDYSDREH 177

  Fly   196 LGAKLDYYVRTRIPSGKVTILRLKNRLGLIRARLAGARIATGDVLIFLDAHCEGNIGWCEPLLQR 260
            |...|:.|:   ....||.::|.:.|.||:||||.||.||||:||.|||.|||.:.||.||||||
Zfish   178 LKEPLENYI---ADLKKVRLIRARKREGLVRARLLGASIATGEVLTFLDCHCECHEGWLEPLLQR 239

  Fly   261 IKESRTSVLVPIIDVIDANDFQYSTNGYKSFQVGGFQWNGHFDWINLPEREKQRQRRECKQEREI 325
            |||..::|:.|:|||||.|.|||..|..:. |:|||.|...|.|.::||.|::|:.......|  
Zfish   240 IKEEPSAVVCPVIDVIDWNTFQYLGNPGEP-QIGGFDWRLVFTWHSIPEHEQKRRSAATDVVR-- 301

  Fly   326 CPAYSPTMAGGLFAIDRRYFWEVGSYDEQMDGWGGENLEMSFRIWQCGGTIETIPCSRVGHIFRD 390
                ||||||||||::::||..:|:||..|:.|||||||.|||||||||::|..|||.|||:|  
Zfish   302 ----SPTMAGGLFAVNKKYFLYLGTYDTGMEVWGGENLEFSFRIWQCGGSLEIHPCSHVGHVF-- 360

  Fly   391 FHPYKFPNDRDTHGINTARMALVWMDEYINIFFLNRPDLKFHADIGDVTHRVMLRKKLRCKSFEW 455
              |.|.|..|:....|:.|.|.||||::..:::...|..:..| .||||.|..||.:||||.|.|
Zfish   361 --PKKAPYSRNKALANSVRAAEVWMDDFKEVYYHRSPHARLEA-YGDVTDRRKLRMRLRCKDFRW 422

  Fly   456 YLKNIYPEKFVPTKDVQGWGKV-HAVNSNICLDDLLQNNEKPYN-------AG----LYPCGKVL 508
            :|.||||:..||......:|.: :...:|.|.|         ||       ||    ||||..:.
Zfish   423 FLDNIYPDIQVPEDKPGMFGMLKNKGMTNYCFD---------YNPPDEHKIAGHRVILYPCHGMG 478

  Fly   509 QKSQLFSFTNTNVLRNELSCATVQHSESPPYRVVMVP---------CME-NDEFNEQWRY---EH 560
            | :|.|.::....:|        .::..|...||..|         |.: .:...|..::   |.
Zfish   479 Q-NQFFEYSTLQEIR--------YNTRDPAGCVVADPVSTFLTMNLCSKPREAVPEDQKFLFRED 534

  Fly   561 QHIIHSNTGMCLDHQGLKSLD--DA-----QVAPCDPHSESQRWTIE 600
            ..:.|..|..|::     ::|  ||     .:.||. .|::|:|..|
Zfish   535 GSLYHVQTQKCVE-----AVDRTDAGSPGPALRPCS-DSDAQKWFFE 575

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant1NP_611043.1 WcaA 147..426 CDD:223539 143/278 (51%)
pp-GalNAc-T 152..461 CDD:133004 156/308 (51%)
Ricin_B_lectin 474..597 CDD:279046 33/154 (21%)
RICIN 481..599 CDD:238092 33/148 (22%)
galnt12XP_688194.1 pp-GalNAc-T 134..428 CDD:133004 156/308 (51%)
Ricin_B_lectin 440..572 CDD:279046 33/155 (21%)
RICIN 442..574 CDD:238092 34/155 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3736
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D606683at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.820

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