DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgant1 and galnt13

DIOPT Version :9

Sequence 1:NP_611043.1 Gene:Pgant1 / 36717 FlyBaseID:FBgn0034025 Length:601 Species:Drosophila melanogaster
Sequence 2:XP_031748551.1 Gene:galnt13 / 550031 XenbaseID:XB-GENE-1012445 Length:571 Species:Xenopus tropicalis


Alignment Length:612 Identity:227/612 - (37%)
Similarity:332/612 - (54%) Gaps:78/612 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 RSFYGKLI-----IFILVALCFILY-SKVQQNGSPEEPPVAPLVRAAALRGHGRERFEAYSDSEN 64
            |..|.|::     :::|:.:..:|| |:..:....::..:.|.:||.                  
 Frog     3 RFIYCKVVLATSLVWVLLDVFLLLYFSECNKCDDRKDRSLLPALRAV------------------ 49

  Fly    65 EIARPATQSPYEQIIQLDLQKQKVGLGEQGVAVHLSGAAKERGDEIYKKIALNEELSEQLTYNRS 129
                              :.:...|.||.|.||.:....:|:..|::|....|...|:.:..|||
 Frog    50 ------------------ISRTPEGPGELGKAVIIPKDDQEKMKELFKINQFNLMASDLIALNRS 96

  Fly   130 VGDHRNPLCAKQRFDSDSLPTASVVIIFFNEPYSVLLRTVHSTLSTCNEKALKEIILVDDGSDNV 194
            :.|.|...| |.:...|.||..|:||:|.||.:|.|||||||.::....:.:.|||||||.|:..
 Frog    97 LPDVRLEGC-KTKVYPDELPNTSIVIVFHNEAWSTLLRTVHSVINRSPHRLISEIILVDDSSERD 160

  Fly   195 ELGAKLDYYVR-TRIPSGKVTILRLKNRLGLIRARLAGARIATGDVLIFLDAHCEGNIGWCEPLL 258
            .|.:.|:.||: ..:|   |.|||::.|.|||||||.||.:|.|.::.|||||||..|||.||||
 Frog   161 FLKSPLENYVKHLEVP---VKILRMEQRSGLIRARLRGANVAKGQIITFLDAHCECTIGWLEPLL 222

  Fly   259 QRIKESRTSVLVPIIDVIDANDFQYSTNGYKSFQVGGFQWNGHFDWINLPEREKQRQRRECKQER 323
            .||||.|.:|:.||||||..:.|:|......::  |||.|..:|.|..:|:||..|:    |.:|
 Frog   223 ARIKEDRKTVVCPIIDVISDDTFEYMAGSDMTY--GGFNWKLNFRWYPVPQREMDRR----KGDR 281

  Fly   324 EICPAYSPTMAGGLFAIDRRYFWEVGSYDEQMDGWGGENLEMSFRIWQCGGTIETIPCSRVGHIF 388
            .: |..:||||||||:||:.||.|:|:||..||.|||||||||||||||||::|.:.||.|||:|
 Frog   282 TL-PVRTPTMAGGLFSIDKTYFEELGTYDSGMDIWGGENLEMSFRIWQCGGSLEIVTCSHVGHVF 345

  Fly   389 RDFHPYKFPNDRDTHGI--NTARMALVWMDEYINIFFLNRPDLKFHADIGDVTHRVMLRKKLRCK 451
            |...||.||.... |.|  |..|:|.||||::.:.|::..|.: ...|.|||:.|..||:.|:|.
 Frog   346 RKATPYTFPGGTG-HVINKNNRRLAEVWMDDFKDFFYIISPGV-VKVDYGDVSERKALRENLKCN 408

  Fly   452 SFEWYLKNIYPEKFVPTKDVQGWGKVHAVNSNICLDDL-LQNNEKPYNAGLYPCGKVLQKSQLFS 515
            .|.|||:.:||:..:|.: ....|::..|.:|.|||:: .:.|||   .|::.| ..:..:|:||
 Frog   409 PFSWYLETVYPDSQIPRR-YFSLGEIRNVETNQCLDNMGRKENEK---VGIFNC-HGMGGNQVFS 468

  Fly   516 FTNTNVLRNELSCATVQHSESPPYRVVMVPCMENDEFNEQWRY--EHQHIIHSNTGMCLDHQGLK 578
            :|....:|.:..|..|.....|   |:|:.| .:...|:.|.|  |....:|..|..||.   |.
 Frog   469 YTADKEIRTDDLCLDVSRLNGP---VIMLKC-HHMRGNQLWEYDAETHTFLHIITQSCLT---LS 526

  Fly   579 SLDDAQVAP----CDPHSESQRWTIEH 601
            :::|....|    |:..:: ||||:.:
 Frog   527 NVEDGTFGPTVEFCNGRNQ-QRWTLRN 552

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant1NP_611043.1 WcaA 147..426 CDD:223539 143/281 (51%)
pp-GalNAc-T 152..461 CDD:133004 155/311 (50%)
Ricin_B_lectin 474..597 CDD:279046 35/129 (27%)
RICIN 481..599 CDD:238092 35/124 (28%)
galnt13XP_031748551.1 pp-GalNAc-T 118..418 CDD:133004 155/311 (50%)
Ricin_B_lectin 431..548 CDD:395527 35/128 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D606683at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11675
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.020

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