DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pgant1 and poc1bl

DIOPT Version :10

Sequence 1:NP_611043.1 Gene:Pgant1 / 36717 FlyBaseID:FBgn0034025 Length:601 Species:Drosophila melanogaster
Sequence 2:NP_001038243.2 Gene:poc1bl / 503760 ZFINID:ZDB-GENE-050306-41 Length:582 Species:Danio rerio


Alignment Length:633 Identity:231/633 - (36%)
Similarity:330/633 - (52%) Gaps:105/633 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 IFILVALCFI-----LYSKVQQNGSP---------------EEPPVAPLVRAAALRGHGRERFEA 58
            :.:|..:||:     |:..:....||               :.||:.                |.
Zfish     9 VAVLAKVCFLFSLLWLFCLLIVRSSPPSLADNDGRRDILARDLPPIE----------------EE 57

  Fly    59 YSDSENEIARPATQSPYEQIIQLDLQKQKVGLGEQGVAVHLSGAAKERGDE--IYKKIALNEELS 121
            ..|||| :.||.    ||:     |.......||.|.|..|:..::|:.:|  ..::.|:|..:|
Zfish    58 EEDSEN-LLRPV----YEK-----LPPDSNAPGEYGRATRLTLTSEEKKEEEASVERCAINIFIS 112

  Fly   122 EQLTYNRSVGDHRNPLCAKQRFDSDSLPTASVVIIFFNEPYSVLLRTVHSTLSTCNEKALKEIIL 186
            ::::.:|.:.|:|...|..::::...|||.||||.|:||.:|.||||:||.|.|.....||:|||
Zfish   113 DKISLHRHIQDNRMHECKAKKYNIRRLPTTSVVIAFYNEAWSTLLRTIHSVLETTPAVLLKDIIL 177

  Fly   187 VDDGSDNVELGAKLDYYVRTRIPSGKVTILRLKNRLGLIRARLAGARIATGDVLIFLDAHCEGNI 251
            |||.||...|.::|..|:..   ..:|.::|.|.|.||:||||.||..|||.||.|||.|||...
Zfish   178 VDDFSDRGYLKSQLAQYISN---LERVRLIRTKKREGLVRARLIGATYATGSVLTFLDCHCECVP 239

  Fly   252 GWCEPLLQRIKESRTSVLVPIIDVIDANDFQYSTNGYKSFQ---VGGFQWNGHFDWINLPEREKQ 313
            ||.||||:||.|:.|:::.|:||.||.|.|::    |...:   ||||.|...|.|..:||.:  
Zfish   240 GWIEPLLERIAENETTIICPVIDTIDWNTFEF----YMQTEEPMVGGFDWRLTFQWHAVPEID-- 298

  Fly   314 RQRRECKQEREICPAYSPTMAGGLFAIDRRYFWEVGSYDEQMDGWGGENLEMSFRIWQCGGTIET 378
               |:.::.| |.|..||||||||||:.:.||..:|:||..|:.|||||||:|||:|||||::|.
Zfish   299 ---RKIRKSR-IDPIRSPTMAGGLFAVSKAYFEYLGTYDMGMEVWGGENLELSFRVWQCGGSLEI 359

  Fly   379 IPCSRVGHIFRDFHPYKFPNDRDTHGINTARMALVWMDEYINIFFLNRPDLKFHADIGDVTHRVM 443
            .|||.|||:|    |.|.|..|.....||.|.|.||||.|...|:...|..: ....||::.|::
Zfish   360 HPCSHVGHVF----PKKAPYARSNFLQNTVRAAEVWMDTYKQHFYNRNPPAR-KESYGDISERIV 419

  Fly   444 LRKKLRCKSFEWYLKNIYPEKFVPTKDVQGW-GKVHA--VNSNICLDDLLQNNEKPYNAGLY-PC 504
            ||.:|:||||||||:|:||...|| :|..|| |.|.:  ::|. |||         |||..: |.
Zfish   420 LRNRLQCKSFEWYLQNVYPGLHVP-EDRPGWHGAVRSAGIHSE-CLD---------YNAPDHNPT 473

  Fly   505 GKVLQ--------KSQLFSFTNTNVLR----NELSCATVQHSESPPYRVVMVPCMENDEFNEQ-- 555
            |..|.        .:|.|.:|:...:|    .|| ||.||...:   .:.|..|.::......  
Zfish   474 GAHLSLFGCHGQGGNQYFEYTSQREIRFNSVTEL-CAEVQDGMT---HIGMKHCPQDGVPKPPSI 534

  Fly   556 -WRY-EHQHIIHSNTGMCL-DHQGLKSLDDAQVAPCDPHSESQRWTIE 600
             |:: |...|.|.::.||: .::..:...|.|:..|....:.|||:.|
Zfish   535 IWQFREDGSIFHPHSNMCITSYRTEEGRADIQMRSCSTGDKHQRWSFE 582

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant1NP_611043.1 pp-GalNAc-T 152..461 CDD:133004 152/311 (49%)
beta-trefoil_Ricin_Pgant1-like 468..601 CDD:467337 40/154 (26%)
poc1blNP_001038243.2 pp-GalNAc-T 143..437 CDD:133004 152/311 (49%)
beta-trefoil_Ricin-like 447..582 CDD:483949 38/148 (26%)

Return to query results.
Submit another query.