DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgant1 and Galnt4

DIOPT Version :9

Sequence 1:NP_611043.1 Gene:Pgant1 / 36717 FlyBaseID:FBgn0034025 Length:601 Species:Drosophila melanogaster
Sequence 2:NP_001020224.2 Gene:Galnt4 / 500826 RGDID:1564589 Length:578 Species:Rattus norvegicus


Alignment Length:608 Identity:230/608 - (37%)
Similarity:327/608 - (53%) Gaps:63/608 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 IIFILVALCFILYSKVQQNGSPEEPPVAPLVRAAA---LRGHGRERFEAYSDSENEIARPATQSP 74
            ::..|:.|.:||.          |..|:.|..::.   .|..|..|...:...|.::::|..:.|
  Rat    13 LLLALLTLAYILV----------EFSVSTLYASSGADRARELGPRRLSDHETREEDLSQPLYKKP 67

  Fly    75 YEQIIQLDLQKQKVGLGEQGVAVHL---SGAAKERGDEIYKKIALNEELSEQLTYNRSVGDHRNP 136
                     ......|||.|.|..|   .|..|:: :|:.::.|:|..||::::.:|.:.|.|..
  Rat    68 ---------PADSHALGEWGRASKLQLDEGELKQQ-EELIERYAINIYLSDRISLHRHIEDKRMY 122

  Fly   137 LCAKQRFDSDSLPTASVVIIFFNEPYSVLLRTVHSTLSTCNEKALKEIILVDDGSDNVELGAKLD 201
            .|..::|...||||.||:|.|:||.:|.||||:||.|.|.....|||||||||.||.:.|.|:|:
  Rat   123 ECKAKKFHYRSLPTTSVIIAFYNEAWSTLLRTIHSVLETSPAVLLKEIILVDDLSDRIYLKAQLE 187

  Fly   202 YYVRTRIPSGKVTILRLKNRLGLIRARLAGARIATGDVLIFLDAHCEGNIGWCEPLLQRIKESRT 266
            .|:..   ..:|.::|...|.||:||||.||..||||||.|||.|||.|.||.||||:||....|
  Rat   188 AYISN---LDRVRLIRTNKREGLVRARLIGATFATGDVLTFLDCHCECNTGWLEPLLERISRDET 249

  Fly   267 SVLVPIIDVIDANDFQ-YSTNGYKSFQVGGFQWNGHFDWINLPEREKQRQRRECKQEREICPAYS 330
            :::.|:||.||.|.|: |...|..  .:|||.|...|.|.::|:.|:.|      :...|.|..|
  Rat   250 AIVCPVIDTIDWNTFEFYMQTGEP--MIGGFDWRLTFQWHSVPKHERDR------RTSRIDPIRS 306

  Fly   331 PTMAGGLFAIDRRYFWEVGSYDEQMDGWGGENLEMSFRIWQCGGTIETIPCSRVGHIFRDFHPYK 395
            |||||||||:.::||..:|:||..|:.|||||||:|||:|||||.:|..|||.|||:|....||.
  Rat   307 PTMAGGLFAVSKKYFQYLGTYDTGMEVWGGENLELSFRVWQCGGKLEIHPCSHVGHVFPKRAPYA 371

  Fly   396 FPNDRDTHGINTARMALVWMDEYINIFFLNRPDLKFHADIGDVTHRVMLRKKLRCKSFEWYLKNI 460
            .||...    ||||.|.||||:|...|:...|..: ....||::.|.:||::|:||||:|||||:
  Rat   372 RPNFLQ----NTARAAEVWMDDYKEHFYNRNPPAR-KETYGDISERKLLRERLQCKSFDWYLKNV 431

  Fly   461 YPEKFVPTKDVQGW-GKVHAVN-SNICLD-DLLQNNEKPYNAGLYPC-GKVLQKSQLFSFTNTNV 521
            :....|| :|..|| |.:.::. |:.||| :...||....|..|:.| |:  ..:|.|.:|:...
  Rat   432 FSNLHVP-EDRPGWHGAIRSMGISSECLDYNAPDNNPTGANLSLFGCHGQ--GGNQFFEYTSNKE 493

  Fly   522 LR----NELSCATVQHSESPPYRVVMVPCMEND---EFNEQWRY-EHQHIIHSNTGMCLD-HQGL 577
            :|    .|| ||.|...:.   .|.|..|.::.   ..|..|.: |...|.|.:|.:||. ::..
  Rat   494 IRFNSVTEL-CAEVPQQKD---YVGMQNCPKDGLPIPVNIIWHFKEDGTIFHPHTRLCLSAYRTA 554

  Fly   578 KSLDDAQVAPCDPHSESQRWTIE 600
            ......|:..||...::|.|..|
  Rat   555 DGRPSVQMKTCDALDKNQIWRFE 577

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant1NP_611043.1 WcaA 147..426 CDD:223539 141/279 (51%)
pp-GalNAc-T 152..461 CDD:133004 153/309 (50%)
Ricin_B_lectin 474..597 CDD:279046 36/135 (27%)
RICIN 481..599 CDD:238092 35/129 (27%)
Galnt4NP_001020224.2 WcaA 133..430 CDD:223539 155/312 (50%)
pp-GalNAc-T 138..432 CDD:133004 153/309 (50%)
RICIN 446..576 CDD:238092 36/135 (27%)
Ricin_B_lectin 446..574 CDD:279046 35/133 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D606683at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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