DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgant1 and Galnt4

DIOPT Version :10

Sequence 1:NP_611043.1 Gene:Pgant1 / 36717 FlyBaseID:FBgn0034025 Length:601 Species:Drosophila melanogaster
Sequence 2:NP_001020224.2 Gene:Galnt4 / 500826 RGDID:1564589 Length:578 Species:Rattus norvegicus


Alignment Length:608 Identity:230/608 - (37%)
Similarity:327/608 - (53%) Gaps:63/608 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 IIFILVALCFILYSKVQQNGSPEEPPVAPLVRAAA---LRGHGRERFEAYSDSENEIARPATQSP 74
            ::..|:.|.:||.          |..|:.|..::.   .|..|..|...:...|.::::|..:.|
  Rat    13 LLLALLTLAYILV----------EFSVSTLYASSGADRARELGPRRLSDHETREEDLSQPLYKKP 67

  Fly    75 YEQIIQLDLQKQKVGLGEQGVAVHL---SGAAKERGDEIYKKIALNEELSEQLTYNRSVGDHRNP 136
                     ......|||.|.|..|   .|..|:: :|:.::.|:|..||::::.:|.:.|.|..
  Rat    68 ---------PADSHALGEWGRASKLQLDEGELKQQ-EELIERYAINIYLSDRISLHRHIEDKRMY 122

  Fly   137 LCAKQRFDSDSLPTASVVIIFFNEPYSVLLRTVHSTLSTCNEKALKEIILVDDGSDNVELGAKLD 201
            .|..::|...||||.||:|.|:||.:|.||||:||.|.|.....|||||||||.||.:.|.|:|:
  Rat   123 ECKAKKFHYRSLPTTSVIIAFYNEAWSTLLRTIHSVLETSPAVLLKEIILVDDLSDRIYLKAQLE 187

  Fly   202 YYVRTRIPSGKVTILRLKNRLGLIRARLAGARIATGDVLIFLDAHCEGNIGWCEPLLQRIKESRT 266
            .|:..   ..:|.::|...|.||:||||.||..||||||.|||.|||.|.||.||||:||....|
  Rat   188 AYISN---LDRVRLIRTNKREGLVRARLIGATFATGDVLTFLDCHCECNTGWLEPLLERISRDET 249

  Fly   267 SVLVPIIDVIDANDFQ-YSTNGYKSFQVGGFQWNGHFDWINLPEREKQRQRRECKQEREICPAYS 330
            :::.|:||.||.|.|: |...|..  .:|||.|...|.|.::|:.|:.|      :...|.|..|
  Rat   250 AIVCPVIDTIDWNTFEFYMQTGEP--MIGGFDWRLTFQWHSVPKHERDR------RTSRIDPIRS 306

  Fly   331 PTMAGGLFAIDRRYFWEVGSYDEQMDGWGGENLEMSFRIWQCGGTIETIPCSRVGHIFRDFHPYK 395
            |||||||||:.::||..:|:||..|:.|||||||:|||:|||||.:|..|||.|||:|....||.
  Rat   307 PTMAGGLFAVSKKYFQYLGTYDTGMEVWGGENLELSFRVWQCGGKLEIHPCSHVGHVFPKRAPYA 371

  Fly   396 FPNDRDTHGINTARMALVWMDEYINIFFLNRPDLKFHADIGDVTHRVMLRKKLRCKSFEWYLKNI 460
            .||...    ||||.|.||||:|...|:...|..: ....||::.|.:||::|:||||:|||||:
  Rat   372 RPNFLQ----NTARAAEVWMDDYKEHFYNRNPPAR-KETYGDISERKLLRERLQCKSFDWYLKNV 431

  Fly   461 YPEKFVPTKDVQGW-GKVHAVN-SNICLD-DLLQNNEKPYNAGLYPC-GKVLQKSQLFSFTNTNV 521
            :....|| :|..|| |.:.::. |:.||| :...||....|..|:.| |:  ..:|.|.:|:...
  Rat   432 FSNLHVP-EDRPGWHGAIRSMGISSECLDYNAPDNNPTGANLSLFGCHGQ--GGNQFFEYTSNKE 493

  Fly   522 LR----NELSCATVQHSESPPYRVVMVPCMEND---EFNEQWRY-EHQHIIHSNTGMCLD-HQGL 577
            :|    .|| ||.|...:.   .|.|..|.::.   ..|..|.: |...|.|.:|.:||. ::..
  Rat   494 IRFNSVTEL-CAEVPQQKD---YVGMQNCPKDGLPIPVNIIWHFKEDGTIFHPHTRLCLSAYRTA 554

  Fly   578 KSLDDAQVAPCDPHSESQRWTIE 600
            ......|:..||...::|.|..|
  Rat   555 DGRPSVQMKTCDALDKNQIWRFE 577

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant1NP_611043.1 pp-GalNAc-T 152..461 CDD:133004 153/309 (50%)
beta-trefoil_Ricin_Pgant1-like 468..601 CDD:467337 40/146 (27%)
Galnt4NP_001020224.2 pp-GalNAc-T 138..432 CDD:133004 153/309 (50%)
beta-trefoil_Ricin-like 442..577 CDD:483949 38/140 (27%)

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