DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgant1 and galnt6

DIOPT Version :9

Sequence 1:NP_611043.1 Gene:Pgant1 / 36717 FlyBaseID:FBgn0034025 Length:601 Species:Drosophila melanogaster
Sequence 2:NP_998361.1 Gene:galnt6 / 406477 ZFINID:ZDB-GENE-040426-2272 Length:619 Species:Danio rerio


Alignment Length:629 Identity:220/629 - (34%)
Similarity:322/629 - (51%) Gaps:70/629 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 GKLIIFILVALCFILYSKVQQNGSPEEPPVAPLVRAAALRGHGRER-FEAYSDSENEIA------ 67
            |.|.:.|||.|     .:...:|:.::|.:..|       .:.:|| ||....:.|..|      
Zfish    17 GTLFMLILVVL-----QRDVNSGALQDPWLQDL-------SNKKERVFEMVRGAVNNFAFQIGAP 69

  Fly    68 -RPATQ--------SPYEQIIQLDLQ-------KQKVGLGEQGVAVHLSGAAKERGDEIYK---K 113
             ||:.:        .|.....|.:|:       :.....|..||........||...|..:   :
Zfish    70 VRPSVEVQPTPDRNCPSGFYTQRELKPWIERPPENPQAPGADGVPFQYDRMTKEEEKEKQEGMTR 134

  Fly   114 IALNEELSEQLTYNRSVGDH-RNPLCAKQRF-DSDSLPTASVVIIFFNEPYSVLLRTVHSTLSTC 176
            ...|:..|::::.:|::||. |.|.|..::| ...:|||.||:|:|.||.:|.|||||:|.|.|.
Zfish   135 HCFNQFASDRISLHRTLGDDTRPPECVDRKFRRCPALPTTSVIIVFHNEAWSTLLRTVYSVLHTS 199

  Fly   177 NEKALKEIILVDDGSDNVELGAKLDYYVRT-RIPSGKVTILRLKNRLGLIRARLAGARIATGDVL 240
            ....|||||:|||.|....|..||:.||:. :|    |.::|...|.|||.|||.||..|.|::|
Zfish   200 PAAFLKEIIMVDDASTAEHLHGKLEEYVKALKI----VKVVRQPERKGLITARLLGASKAEGEIL 260

  Fly   241 IFLDAHCEGNIGWCEPLLQRIKESRTSVLVPIIDVIDANDFQY--STNGYKSFQVGGFQWNGHFD 303
            .|||||||...||.||||.||.|..|:|:.|.|..||.|.||:  .....::...|.|.|:..|.
Zfish   261 TFLDAHCECFHGWLEPLLARIVEEPTAVVSPEITTIDLNTFQFHKPVATARAHNRGNFDWSLTFG 325

  Fly   304 WINLPEREKQRQRRECKQEREICPAYSPTMAGGLFAIDRRYFWEVGSYDEQMDGWGGENLEMSFR 368
            |..:|:.|      ..|::.|..|..:||.|||||:|.:.||.::|:||::|:.|||||:|||||
Zfish   326 WEGIPDYE------NAKRKDETYPVKTPTFAGGLFSISKAYFEKIGTYDDKMEIWGGENVEMSFR 384

  Fly   369 IWQCGGTIETIPCSRVGHIFRDFHPYKFPNDRDTHGINTARMALVWMDEYINIFF---LNRPDLK 430
            :|||||.:|.||||.|||:||...|:.||...:....|..|:|.||||:|..||:   .:...:.
Zfish   385 VWQCGGQLEIIPCSVVGHVFRTKSPHTFPKGTEVITRNQVRLAEVWMDDYKLIFYRRSQSAAKMA 449

  Fly   431 FHADIGDVTHRVMLRKKLRCKSFEWYLKNIYPEKFVPTKDVQGWGKVHAVNSNICLDDLLQNN-E 494
            .....||::.|:.||:.|:||:|.|||.|:|||.|||......:|.:....:..|||....|| .
Zfish   450 KEKGFGDISDRLKLREDLQCKNFSWYLSNVYPEAFVPDLSPVKFGALKNRGAQQCLDVGESNNGG 514

  Fly   495 KPYNAGLYPCGKVLQKSQLFSFTNTNVLRNELSCATVQHSESPPYRVVMVPCMENDEFN-----E 554
            ||  ..:|.|.. :..:|.|.:|:...||:.:.......:...|..|.:..|....:.:     :
Zfish   515 KP--VIMYTCHN-MGGNQYFEYTSHKELRHNIGKQLCLQASPYPEPVKIELCTLKGKGSSLAPEQ 576

  Fly   555 QWRY-EHQHIIHSNTGMCLDHQGLKSLDDAQVAPCDPHSESQRW 597
            :|.. |.|.:.:.::|.||..:|.|.|    ::||:|....|:|
Zfish   577 EWLITEEQLLKNPSSGKCLHKKGDKIL----MSPCNPDDHHQQW 616

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant1NP_611043.1 WcaA 147..426 CDD:223539 134/284 (47%)
pp-GalNAc-T 152..461 CDD:133004 144/314 (46%)
Ricin_B_lectin 474..597 CDD:279046 31/129 (24%)
RICIN 481..599 CDD:238092 31/124 (25%)
galnt6NP_998361.1 pp-GalNAc-T 175..480 CDD:133004 144/314 (46%)
Ricin_B_lectin 493..616 CDD:279046 31/129 (24%)
RICIN 494..618 CDD:238092 32/130 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3736
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D261568at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11675
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.920

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