DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgant1 and Pgant6

DIOPT Version :9

Sequence 1:NP_611043.1 Gene:Pgant1 / 36717 FlyBaseID:FBgn0034025 Length:601 Species:Drosophila melanogaster
Sequence 2:NP_001261342.1 Gene:Pgant6 / 38346 FlyBaseID:FBgn0035375 Length:666 Species:Drosophila melanogaster


Alignment Length:674 Identity:228/674 - (33%)
Similarity:323/674 - (47%) Gaps:126/674 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 KLIIFILVAL-CFIL----YSKVQQNGSPEEPPVAPLVRAAALRGHGRERFEAYSDSENEIARPA 70
            |..:.:|::| .|:|    .|.......|....|.|:...|.|.|..:.:..|       |.:|.
  Fly    11 KASLLLLISLTLFVLITSWISSTPYTNKPVHHGVEPVPEKAGLSGDVKVKVPA-------IKQPE 68

  Fly    71 TQSPYEQIIQLD--LQK------------------------------------------------ 85
            .|.|.|...:.|  |||                                                
  Fly    69 PQKPQEPDFEEDPELQKIDEPEPVEEEVDNPHPADDEPQQQPQEELQMAAPADASVKKDWHDYTF 133

  Fly    86 -----QKVGLGEQGVAVHLSGAAKERGDEIYKKIAL----NEELSEQLTYNRSVGDHRNPLCAKQ 141
                 ::|||||.|.|..|...::.   ::.|:::|    |..||:.::.||||.|.|:|||.|:
  Fly   134 MEKDAKRVGLGEGGKASTLDDESQR---DLEKRMSLENGFNALLSDSISVNRSVPDIRHPLCRKK 195

  Fly   142 RFDSDSLPTASVVIIFFNEPYSVLLRTVHSTLSTCNEKALKEIILVDDGSDNVELGAKLDYYVRT 206
            .:.: .|||.||:|||:||..|||:|:|||.::....:.:||||||||.||...||.:|:.|:..
  Fly   196 EYVA-KLPTVSVIIIFYNEYLSVLMRSVHSLINRSPPELMKEIILVDDHSDREYLGKELETYIAE 259

  Fly   207 RIPSGKVTILRLKNRLGLIRARLAGARIATGDVLIFLDAHCEGNIGWCEPLLQRIKESRTSVLVP 271
            ...  .|.::||..|.|||.||.||||.||.:||||||:|.|.|..|..|||:.|..::.:.:.|
  Fly   260 HFK--WVRVVRLPRRTGLIGARAAGARNATAEVLIFLDSHVEANYNWLPPLLEPIALNKRTAVCP 322

  Fly   272 IIDVIDANDFQY--STNGYKSFQVGGFQWNGHFDWIN-LPEREKQRQRRECKQEREICPAYSPTM 333
            .|||||..:|.|  ...|.:    |.|.|...:..:. |||        :.|...:  |..||.|
  Fly   323 FIDVIDHTNFHYRAQDEGAR----GAFDWEFFYKRLPLLPE--------DLKHPAD--PFKSPIM 373

  Fly   334 AGGLFAIDRRYFWEVGSYDEQMDGWGGENLEMSFRIWQCGGTIETIPCSRVGHIFRDFHPYK-FP 397
            |||||||.|.:|||:|.|||.:|.||||..|:||:||.|||.:...||||:|||:|....:: .|
  Fly   374 AGGLFAISREFFWELGGYDEGLDIWGGEQYELSFKIWMCGGEMYDAPCSRIGHIYRGPRNHQPSP 438

  Fly   398 NDRDTHGINTARMALVWMDEYINIFFLNRPDLKFHADIGDVTHRVMLRKKLRCKSFEWYLKNI-- 460
            ...|....|..|:|.||||||.|..:.:...|....|.||:|.:..:|.||.||||:|:::.:  
  Fly   439 RKGDYLHKNYKRVAEVWMDEYKNYLYSHGDGLYESVDPGDLTEQKAIRTKLNCKSFKWFMEEVAF 503

  Fly   461 -----YPEKFVPTKDVQGWGKVHAV-NSNICLDDLLQNNEKPYNAGLYPCG---KVLQKSQLF-- 514
                 ||....|:   ...|.:..| |.|:|||.|  ..:|....|:|.|.   |..|::|.:  
  Fly   504 DLMKTYPPVDPPS---YAMGALQNVGNQNLCLDTL--GRKKHNKMGMYACADNIKTPQRTQFWEL 563

  Fly   515 SFTNTNVLRNELSCATVQ--HSESPPYRVVMVPCMENDEFNEQWRYEHQH--IIHSNTG-MCLDH 574
            |:.....||.:..|..||  .:.:|   |.:..| .:...|:.|.|:::|  :.|...| .||: 
  Fly   564 SWKRDLRLRRKKECLDVQIWDANAP---VWLWDC-HSQGGNQYWYYDYRHKQLKHGTEGRRCLE- 623

  Fly   575 QGLKSLDDAQVA-PCDPHSESQRW 597
              |.......|| .||..:..|:|
  Fly   624 --LLPFSQEVVANKCDTDNRFQQW 645

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant1NP_611043.1 WcaA 147..426 CDD:223539 128/282 (45%)
pp-GalNAc-T 152..461 CDD:133004 138/319 (43%)
Ricin_B_lectin 474..597 CDD:279046 38/134 (28%)
RICIN 481..599 CDD:238092 37/128 (29%)
Pgant6NP_001261342.1 BcsA 199..>413 CDD:224136 105/230 (46%)
pp-GalNAc-T 205..502 CDD:133004 138/312 (44%)
RICIN 520..647 CDD:238092 39/135 (29%)
Ricin_B_lectin 520..645 CDD:279046 38/133 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3736
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D60373at6656
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11675
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.920

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