DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgant1 and Galnt3

DIOPT Version :9

Sequence 1:NP_611043.1 Gene:Pgant1 / 36717 FlyBaseID:FBgn0034025 Length:601 Species:Drosophila melanogaster
Sequence 2:NP_001015032.2 Gene:Galnt3 / 366061 RGDID:1306443 Length:633 Species:Rattus norvegicus


Alignment Length:653 Identity:231/653 - (35%)
Similarity:322/653 - (49%) Gaps:104/653 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 RSFY--GKLIIFILVALCFILYSKVQQNGSPEEPPVAPLVRAAALRGHGRERFEAYSDSENEI-- 66
            |.|:  |.:|.|.||.| .::..:|....|.||..:...::      :..:.|:...::.|.|  
  Rat    18 RKFWKLGAVIFFFLVVL-ILMQREVSVQYSKEESKMERNLK------NKNKMFDFMLEAVNNIKD 75

  Fly    67 ARPATQ--SPYEQIIQ-------------------LDLQKQKVGL----GEQGVAVHLS---GAA 103
            |.|..|  :|.:|.|.                   ||...|....    |:.....|||   ...
  Rat    76 AMPKMQIGAPIKQNIDVPERPCLQGYYTAAELKPVLDRPPQDSNAPGASGKPFKITHLSPEEQKE 140

  Fly   104 KERGDEIYKKIALNEELSEQLTYNRSVG-DHRNPLCAKQRFD-SDSLPTASVVIIFFNEPYSVLL 166
            ||||:   .|...|...|::::.:|.:| |.|.|.|.:|:|. ...|||.||:|:|.||.:|.||
  Rat   141 KERGE---TKHCFNAFASDRISLHRDLGPDTRPPECIEQKFKRCPPLPTTSVIIVFHNEAWSTLL 202

  Fly   167 RTVHSTLSTCNEKALKEIILVDDGSDNVELGAKLDYYVRTRIPSGKVTILRLKNRLGLIRARLAG 231
            |||||.|.:.....|||||||||.|.:..|..||:.|::   ....|.|:|.:.|.|||.|||.|
  Rat   203 RTVHSVLYSSPAILLKEIILVDDASVDDYLHEKLEEYIK---QFSIVKIVRQQERKGLITARLLG 264

  Fly   232 ARIATGDVLIFLDAHCEGNIGWCEPLLQRIKESRTSVLVPIIDVIDANDFQ------YSTNGYKS 290
            |.:||.:.|.|||||||...||.||||.||.|:.|:|:.|.|..||.|.|:      |.:|..: 
  Rat   265 AAVATAETLTFLDAHCECFYGWLEPLLARIAENYTAVVSPDIASIDLNTFEFNKPSPYGSNHNR- 328

  Fly   291 FQVGGFQWNGHFDWINLPEREKQRQRRECKQEREICPAYSPTMAGGLFAIDRRYFWEVGSYDEQM 355
               |.|.|:..|.|.:||:.||||::      .|..|..:||.|||||:|.|.||..:|||||:|
  Rat   329 ---GNFDWSLSFGWESLPDHEKQRRK------DETYPIKTPTFAGGLFSISRDYFEHIGSYDEEM 384

  Fly   356 DGWGGENLEMSFRIWQCGGTIETIPCSRVGHIFRDFHPYKFPNDRDTHGINTARMALVWMDEYIN 420
            :.|||||:|||||:|||||.:|.:|||.|||:||...|:.||........|..|:|.||||||..
  Rat   385 EIWGGENIEMSFRVWQCGGQLEIMPCSVVGHVFRSKSPHTFPKGTQVIARNQVRLAEVWMDEYKE 449

  Fly   421 IFFLNRPD---LKFHADIGDVTHRVMLRKKLRCKSFEWYLKNIYPEKFVPTKDVQGWGKVHAVNS 482
            ||:....|   :......||::.|..::|:|:||:|.|||..||||.:||..:....|.:.:|..
  Rat   450 IFYRRNTDAAKIVKQKSFGDLSKRFEIKKRLQCKNFTWYLNTIYPEVYVPDLNPVISGYIKSVGQ 514

  Fly   483 NICLDDLLQNNEKPYNAGLYPCGKVLQKSQLFSFTNTNVLRNEL----------------SCATV 531
            .:|| |:.:||:......||.| ..|..:|.|.::....:|:.:                :|...
  Rat   515 PLCL-DVGENNQGDKPLILYTC-HGLGGNQYFEYSAQREIRHNIQKELCLHATQGVVQLKACVYK 577

  Fly   532 QHSESPPYRVVMVPCMENDEFNEQ-WRYEHQHIIHSNT-GMCLDHQGLKSLDDAQVAPCDPHSES 594
            .|....|              .|| |......::::.. .|||...|    :...:.|||.....
  Rat   578 GHRTIAP--------------GEQIWEIRKDQLLYNPLFRMCLSSNG----EHPSLVPCDTTDLL 624

  Fly   595 QRW 597
            |:|
  Rat   625 QKW 627

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant1NP_611043.1 WcaA 147..426 CDD:223539 141/284 (50%)
pp-GalNAc-T 152..461 CDD:133004 150/317 (47%)
Ricin_B_lectin 474..597 CDD:279046 28/140 (20%)
RICIN 481..599 CDD:238092 27/135 (20%)
Galnt3NP_001015032.2 pp-GalNAc-T 188..493 CDD:133004 150/317 (47%)
Ricin_B_lectin 506..627 CDD:279046 28/140 (20%)
RICIN 507..629 CDD:238092 29/141 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3736
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D261568at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11675
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.920

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