DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgant1 and Galntl6

DIOPT Version :10

Sequence 1:NP_611043.1 Gene:Pgant1 / 36717 FlyBaseID:FBgn0034025 Length:601 Species:Drosophila melanogaster
Sequence 2:NP_001129228.1 Gene:Galntl6 / 361142 RGDID:1564773 Length:601 Species:Rattus norvegicus


Alignment Length:621 Identity:204/621 - (32%)
Similarity:316/621 - (50%) Gaps:74/621 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 KLIIFILVALCFI-------LY--SKVQQNGSPEEPPVAPLVRAAALRGHGRERFEAYSDSENEI 66
            ::.:...|||.|:       ||  ..:.::..|.|....||       |.|..:|.:::|.    
  Rat    10 QMTLLFTVALIFLPNIGLWSLYKDKHLMKSAEPAEHQTFPL-------GLGDGQFYSWTDG---- 63

  Fly    67 ARPATQSPYEQIIQLDLQKQKVGLGEQGVAVHLSGAAKERGDEIYKKIALNEELSEQLTYNRSVG 131
               ..:..:...:.:.....:.|.||.|....|:  .::..|..|::...|..:|..:...||:.
  Rat    64 ---LRRKDWHDYVSIQKDALRSGKGEHGKPYPLT--EEDHDDSAYRENGFNIFVSNNIALERSLP 123

  Fly   132 DHRNPLCAKQRFDSDSLPTASVVIIFFNEPYSVLLRTVHSTLSTCNEKALKEIILVDDGSDNVEL 196
            |.|:..| |.:...:.||..|::|.|.||.::.||||:||.::...|..:.|||||||.||...|
  Rat   124 DIRHANC-KHKMYLERLPNTSIIIPFHNEGWTSLLRTIHSIINRTPESLIAEIILVDDFSDREHL 187

  Fly   197 GAKLDYYVRTRIPSGKVTILRLKNRLGLIRARLAGARIATGDVLIFLDAHCEGNIGWCEPLLQRI 261
            ..||:.|: .|.|.  |.|:|.|.|.||||.||.||.:|.|:||.|||:|||.|:.|..|||.:|
  Rat   188 KDKLEDYM-ARFPI--VRIVRTKKREGLIRTRLLGASVARGEVLTFLDSHCEVNVNWLPPLLNQI 249

  Fly   262 KESRTSVLVPIIDVIDANDFQYSTNGYKSFQVGGFQWNGHFDWINLPEREKQRQRRECKQEREIC 326
            ..:..:::.|:|||||.:.|.|......:.: |.|.|..::..|.:|   .:.||.:..:     
  Rat   250 ALNHKTIVCPMIDVIDHSHFGYEAQAGDAMR-GAFDWEMYYKRIPIP---PELQRADPSE----- 305

  Fly   327 PAYSPTMAGGLFAIDRRYFWEVGSYDEQMDGWGGENLEMSFRIWQCGGTIETIPCSRVGHIFRDF 391
            |..||.|||||||:||::|||:|.||..::.||||..|:||::|.|||.:..:||||||||:|.:
  Rat   306 PFESPVMAGGLFAVDRKWFWELGGYDPGLEIWGGEQYEISFKVWMCGGEMFDVPCSRVGHIYRKY 370

  Fly   392 HPYKFPNDRDTHGINTARMALVWMDEYINIFFLNRPDLKFHADIGDVTHRVMLRKKLRCKSFEWY 456
            .|||.|:.... ..|..|:|..||||:....:..||:.: |...||::.:..|||:|:||.|:|:
  Rat   371 VPYKVPSGTSL-ARNLKRVAETWMDEFAEYIYQRRPEYR-HLSTGDISAQKELRKRLKCKDFKWF 433

  Fly   457 LKNI---YPEKFVPTKDV-QGWGKVHAVNSNICLDDLLQNNEKPYNAGLYPCGK-----VLQKSQ 512
            :..:   .|:.:.|.:.: ..||::..|.:|:|:|.  ::........|..|.|     .....|
  Rat   434 MAAVAWDVPKYYPPVEPLPAAWGEIRNVAANLCVDS--KHGAMGTELRLDICVKDGSERTWSHEQ 496

  Fly   513 LFSFTNTNVLR-------NELSCATVQHSESPPYRVVMVPCMENDEFNEQWRY-EHQHIIHSNTG 569
            ||:|.....:|       .:.....:.|| ||   |.:..| ...:.|:.|.| |.:.:.|..:.
  Rat   497 LFTFGWREDIRPGEPLHTRKFCLDAISHS-SP---VTLYDC-HGMKGNQLWGYREDRTLFHPVSN 556

  Fly   570 MCLDHQGLKSLDDAQ----VAPCDPHSESQRWTIEH 601
            .|:|      .:.|:    :|.|||.||:|:|..||
  Rat   557 SCMD------CNPAEKKVFMARCDPLSETQQWMFEH 586

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant1NP_611043.1 pp-GalNAc-T 152..461 CDD:133004 133/311 (43%)
beta-trefoil_Ricin_Pgant1-like 468..601 CDD:467337 36/150 (24%)
Galntl6NP_001129228.1 pp-GalNAc-T 143..438 CDD:133004 133/308 (43%)
beta-trefoil_Ricin_GALNTL6 449..594 CDD:467355 38/151 (25%)

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