DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgant1 and Pgant2

DIOPT Version :9

Sequence 1:NP_611043.1 Gene:Pgant1 / 36717 FlyBaseID:FBgn0034025 Length:601 Species:Drosophila melanogaster
Sequence 2:NP_608773.2 Gene:Pgant2 / 33556 FlyBaseID:FBgn0031530 Length:633 Species:Drosophila melanogaster


Alignment Length:666 Identity:220/666 - (33%)
Similarity:319/666 - (47%) Gaps:121/666 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 KLIIFILVALCFILYSKVQQNGSPEEPPVAPLVRAAALRGHGRERFEAYSDSENEIARPAT---- 71
            |||:|:.:...|::....|.:....|.      ||..|| ......:.|.|..:..|..:|    
  Fly     6 KLIVFVSIIWMFVMVYYFQSSTEKVEN------RALRLR-EVATAMQQYQDDSSSAAAASTARQW 63

  Fly    72 --------------------QSPYEQIIQL----DLQKQKV-GLGEQGV---------------- 95
                                ..|...:|.:    |.::..| ||...|:                
  Fly    64 APAGGGAGPGAAAGAAGSGADDPGGNVILIGSVKDFERNAVHGLKLNGIVALEETSQGLSGGTGG 128

  Fly    96 ---------------------AVHLSGAAKERGDEIYKKIALNEELSEQLTYNRSVGDHRNPLCA 139
                                 |.::...|...|::.|.:...|:|.|:.|..||.:.|.|||:|.
  Fly   129 PGGRLPVAPSGRGTEVEYFNEAGYIRAGALRNGEDPYIRNRFNQEASDALPSNRDIPDTRNPMCR 193

  Fly   140 KQRFDSDSLPTASVVIIFFNEPYSVLLRTVHSTLSTCNEKALKEIILVDDGSDNVELG---AKLD 201
            .:::..| ||..||:|.|.||..|.||||:.|.|:...|..::||:||||.||:.|.|   ||:|
  Fly   194 TKKYRED-LPETSVIITFHNEARSTLLRTIVSVLNRSPEHLIREIVLVDDYSDHPEDGLELAKID 257

  Fly   202 YYVRTRIPSGKVTILRLKNRLGLIRARLAGARIATGDVLIFLDAHCEGNIGWCEPLLQRIKESRT 266
                      ||.::|...|.||:|:|:.||..|...||.|||:|.|.|..|.||||:|::|..|
  Fly   258 ----------KVRVIRNDKREGLVRSRVKGADAAVSSVLTFLDSHVECNEMWLEPLLERVREDPT 312

  Fly   267 SVLVPIIDVIDANDFQYSTNGYKSFQVGGFQWNGHFDWINLPEREKQRQRRECKQEREICPAYSP 331
            .|:.|:||||..::|||.  |..:...|||.||..|.|..|...|     |..:.........:|
  Fly   313 RVVCPVIDVISMDNFQYI--GASADLRGGFDWNLIFKWEYLSPSE-----RAMRHNDPTTAIRTP 370

  Fly   332 TMAGGLFAIDRRYFWEVGSYDEQMDGWGGENLEMSFRIWQCGGTIETIPCSRVGHIFRDFHPYKF 396
            .:|||||.||:.||.::|.||.:||.|||||||:|||:|||||::|.||||||||:||..|||.|
  Fly   371 MIAGGLFVIDKAYFNKLGKYDMKMDVWGGENLEISFRVWQCGGSLEIIPCSRVGHVFRKRHPYTF 435

  Fly   397 P-NDRDTHGINTARMALVWMDEYINIFFLNRPDLKFHADIGDVTHRVMLRKKLRCKSFEWYLKNI 460
            | ...:....||.|.|.||||:|...:: |...|..:...|::..|:.|::||.||.|:|||:|:
  Fly   436 PGGSGNVFARNTRRAAEVWMDDYKQHYY-NAVPLAKNIPFGNIDDRLALKEKLHCKPFKWYLENV 499

  Fly   461 YPEKFVPTKDVQGWGKVHAVNSNICLD---DLLQNNEKPYNAGLYPCGKVLQKSQLFSFTNTNVL 522
            ||:...|  |.|..|:... :|..|||   .|:..     ..|::||... ..:|.::||....:
  Fly   500 YPDLQAP--DPQEVGQFRQ-DSTECLDTMGHLIDG-----TVGIFPCHNT-GGNQEWAFTKRGEI 555

  Fly   523 RNELSCATVQHSESPPYRVVMVPCMENDEFNEQWRYEHQHII-HSNTGMCLDHQGLKSLDDAQVA 586
            :::..|.|:. :.:...:||:..|  :|..|::|......:: |....:|||     |.|.:|..
  Fly   556 KHDDLCLTLV-TFARGSQVVLKAC--DDSENQRWIMREGGLVRHYKINVCLD-----SRDQSQQG 612

  Fly   587 PCDPHSES----QRWT 598
            ....|..|    |||:
  Fly   613 VSAQHCNSALGTQRWS 628

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant1NP_611043.1 WcaA 147..426 CDD:223539 131/282 (46%)
pp-GalNAc-T 152..461 CDD:133004 143/312 (46%)
Ricin_B_lectin 474..597 CDD:279046 30/130 (23%)
RICIN 481..599 CDD:238092 31/126 (25%)
Pgant2NP_608773.2 WcaA 200..>432 CDD:223539 118/249 (47%)
pp-GalNAc-T 205..500 CDD:133004 143/312 (46%)
Ricin_B_lectin 511..627 CDD:279046 30/130 (23%)
RICIN 513..629 CDD:238092 31/131 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3736
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D60373at6656
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11675
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.920

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