DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgant1 and Pgant7

DIOPT Version :9

Sequence 1:NP_611043.1 Gene:Pgant1 / 36717 FlyBaseID:FBgn0034025 Length:601 Species:Drosophila melanogaster
Sequence 2:NP_001285406.1 Gene:Pgant7 / 32836 FlyBaseID:FBgn0030930 Length:591 Species:Drosophila melanogaster


Alignment Length:629 Identity:213/629 - (33%)
Similarity:307/629 - (48%) Gaps:105/629 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 LIIFILVALCFIL------YSKVQQN-----GSPEEPPVAPLVRAAALRGHGRER-----FEAYS 60
            |.:.:|:.|.::|      :.:||:.     |.|         :.|..|..||.|     .:...
  Fly    16 LCLLVLLPLLYLLANWSDHHKRVQEAYHTRFGGP---------KFAHQRLEGRPREVPKLVDGLG 71

  Fly    61 DSENEIARPATQSPYEQIIQLDLQKQKVGLGEQGVAVHLSGAAKERGDEIYKKIALNEELSEQLT 125
            :.|.:..:|                 :.|.||.|.|..||...|...|....:..:|...|::::
  Fly    72 NFEPKDVKP-----------------RSGPGENGEAHSLSPDKKHMSDASEMEYGMNIACSDEIS 119

  Fly   126 YNRSVGDHRNPLCAKQRFDSDSLPTASVVIIFFNEPYSVLLRTVHSTLSTCNEKALKEIILVDDG 190
            .:|||.|.|...|....:..| ||..||:|:|.||.:|||:|||||.:.......|.|||||||.
  Fly   120 MHRSVRDTRLEECRHWDYPFD-LPRTSVIIVFHNEGFSVLMRTVHSVIDRSPTHMLHEIILVDDF 183

  Fly   191 SDNVELGAKLDYYVRTRIPSGKVTILRLKNRLGLIRARLAGARIATGDVLIFLDAHCEGNIGWCE 255
            ||...|.::||.||...  .|.|.::|.|.|.||||.|..||..|||:|::|||||||.|..|..
  Fly   184 SDKENLRSQLDEYVLQF--KGLVKVIRNKEREGLIRTRSRGAMEATGEVIVFLDAHCEVNTNWLP 246

  Fly   256 PLLQRIKESRTSVLVPIIDVIDANDFQY-----STNGYKSFQVGGFQWNGHFDWINLPEREKQRQ 315
            |||..|...||.:.|||||.||..:|:|     :.|.::    |.|:|...:....:|.||::|:
  Fly   247 PLLAPIYRDRTVMTVPIIDGIDHKNFEYRPVYGTDNHFR----GIFEWGMLYKENEVPRREQRRR 307

  Fly   316 RRECKQEREICPAYSPTMAGGLFAIDRRYFWEVGSYDEQMDGWGGENLEMSFRIWQCGGTIETIP 380
            ....:      |..|||.|||||||:|.||.|:|:||..:..|||||.|:||:||||||:||.:|
  Fly   308 AHNSE------PYRSPTHAGGLFAINREYFLELGAYDPGLLVWGGENFELSFKIWQCGGSIEWVP 366

  Fly   381 CSRVGHIFRDFHPYKFPNDRDTHG------------INTARMALVWMDEYINIFFLNRPDLKFHA 433
            ||||||::|.|.||.|       |            ||..|:...|.|:....:|..|..|..:.
  Fly   367 CSRVGHVYRGFMPYNF-------GKLASKKKGPLITINYKRVIETWFDDTHKEYFYTREPLARYL 424

  Fly   434 DIGDVTHRVMLRKKLRCKSFEWYLKNI----YPEKFVPTKDVQGWGKVHAVNSNICLDDLLQNNE 494
            |:||::.::.|:|:|.||||:|::.:|    | :||........||::.:|.|:.|||.:  .::
  Fly   425 DMGDISEQLALKKRLNCKSFQWFMDHIAYDVY-DKFPGLPANLHWGELRSVASDGCLDSM--GHQ 486

  Fly   495 KPYNAGLYPC---GKVLQKSQLFSFTNTNVLRNELSCATVQHSESPPYRVVMVPCMENDEFNEQW 556
            .|...||..|   |    .:||........|.....|.     |:....:.:..| .....:..|
  Fly   487 PPAIMGLTYCHGGG----NNQLVRLNAAGQLGVGERCV-----EADRQGIKLAVC-RLGTVDGPW 541

  Fly   557 RY-EH-QHIIHSNTGMCLD-HQGLKSLDDAQVAPCDPHSESQRW 597
            :| || :|::|.....|:. |...:.|   .:..||.:...|:|
  Fly   542 QYNEHTKHLMHRVHKKCMALHPATQQL---SLGHCDVNDSYQQW 582

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant1NP_611043.1 WcaA 147..426 CDD:223539 132/295 (45%)
pp-GalNAc-T 152..461 CDD:133004 144/329 (44%)
Ricin_B_lectin 474..597 CDD:279046 30/128 (23%)
RICIN 481..599 CDD:238092 28/123 (23%)
Pgant7NP_001285406.1 Glyco_tranf_2_3 142..373 CDD:290369 118/242 (49%)
pp-GalNAc-T 145..452 CDD:133004 143/325 (44%)
Ricin_B_lectin 468..582 CDD:279046 30/128 (23%)
RICIN 469..584 CDD:238092 30/129 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3736
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D28355at6960
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11675
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.920

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