DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pgant1 and Galnt11

DIOPT Version :9

Sequence 1:NP_611043.1 Gene:Pgant1 / 36717 FlyBaseID:FBgn0034025 Length:601 Species:Drosophila melanogaster
Sequence 2:NP_001258248.1 Gene:Galnt11 / 311952 RGDID:735097 Length:609 Species:Rattus norvegicus


Alignment Length:605 Identity:220/605 - (36%)
Similarity:323/605 - (53%) Gaps:67/605 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 FRSFYGKLIIFILVALCFILYSKVQQNGSPEEPPVAPLVRAAALRGHG------RERFEAYSDSE 63
            |.|....:::||     :..:|:|.|          || |...::|.|      ::.:..::...
  Rat    16 FTSATWTVLLFI-----YFNFSEVTQ----------PL-RNVPIKGSGPHGPFPKKFYPRFTRGP 64

  Fly    64 NEIARPATQ-SPYEQIIQLDLQKQKVGLGEQGVAVHLSGAAKERGDEI----YKKIALNEELSEQ 123
            ..:..|..: :..:.::..:::....||.:.  :..|.....||..|:    |:|.|.|..:|.:
  Rat    65 GRVLEPQFKANRMDDLMNNNIEDPDKGLSKS--SSELGMIFNERDQELRDLGYQKHAFNMLISNR 127

  Fly   124 LTYNRSVGDHRNPLCAKQRFDSDSLPTASVVIIFFNEPYSVLLRTVHSTLSTCNEKALKEIILVD 188
            |.|:|.|.|.||..|..:.:.:| ||||||||.|:||.:|.|||||||.:.......|.||||||
  Rat   128 LGYHRDVPDTRNAECRGKSYPTD-LPTASVVICFYNEAFSALLRTVHSVVDRTPAHLLHEIILVD 191

  Fly   189 DGSDNVELGAKLDYYVRTRIPSGKVTILRLKNRLGLIRARLAGARIATGDVLIFLDAHCEGNIGW 253
            |.||..:|..:||.|::..:|: ||.::|...|.||||.|:.||..|||:||:|||:|||.|:.|
  Rat   192 DSSDFDDLKGELDEYIQRYLPA-KVKVIRNMKREGLIRGRMIGAAHATGEVLVFLDSHCEVNVMW 255

  Fly   254 CEPLLQRIKESRTSVLVPIIDVIDANDFQYSTNGYKSFQVGGFQWNGHFDWINLPEREKQRQRRE 318
            .:|||..|.|...:|:.|:||:|.|:...||::....   |||.|..||.|..:|..:..     
  Rat   256 LQPLLAIILEDPHTVVCPVIDIISADTLAYSSSPVVR---GGFNWGLHFKWDLVPVSDLG----- 312

  Fly   319 CKQEREICPAYSPTMAGGLFAIDRRYFWEVGSYDEQMDGWGGENLEMSFRIWQCGGTIETIPCSR 383
             ..:....|..||||||||||::|:||.::|.||..||.|||||||:|||||.|||.:..|||||
  Rat   313 -GADSATAPIRSPTMAGGLFAMNRQYFNDLGQYDSGMDIWGGENLEISFRIWMCGGKLFIIPCSR 376

  Fly   384 VGHIFRDFHPYKFPNDRDTHGINTARMALVWMDEYINIFFLNRPDLKFHADIGDVTHRVMLRKKL 448
            ||||||...||..|..:||...|:.|:|.||:|||...:|..|||||..: .|:::.||.|||||
  Rat   377 VGHIFRKRRPYGSPEGQDTMTHNSLRLAHVWLDEYKEQYFSLRPDLKTKS-FGNISERVELRKKL 440

  Fly   449 RCKSFEWYLKNIYPEKFVPTKDVQGWGKVHAVNSNICLDDLLQNNEKPYNAGLYPCGKVLQKSQL 513
            .|:||:|||.|:|||       :|..|....:...:.::   :..::|         :||.:.:|
  Rat   441 GCQSFKWYLDNVYPE-------MQVSGPKARLQQPVFIN---RGPKRP---------RVLLRGRL 486

  Fly   514 FSFTNTNVLRNELSCATVQHSESPPYRVVMVPCMENDEFNEQWRYEHQHIIHSNTGMCLDHQGLK 578
            :.. .||      .|...|...|....:|::...:..:..:.|.|..:|.:..|..:|||....:
  Rat   487 YHL-QTN------KCLVAQGRSSQKGGLVLLKACDYGDPTQVWIYNEEHELILNNLLCLDMSETR 544

  Fly   579 SLDDAQVAPCDPHSESQRWT 598
            |.|..::..|.....||:||
  Rat   545 SSDPPRLMKCHGSGGSQQWT 564

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant1NP_611043.1 WcaA 147..426 CDD:223539 138/278 (50%)
pp-GalNAc-T 152..461 CDD:133004 154/308 (50%)
Ricin_B_lectin 474..597 CDD:279046 23/122 (19%)
RICIN 481..599 CDD:238092 24/118 (20%)
Galnt11NP_001258248.1 pp-GalNAc-T 155..453 CDD:133004 154/308 (50%)
Glyco_tranf_2_3 155..383 CDD:290369 119/237 (50%)
Ricin_B_lectin 484..605 CDD:279046 21/88 (24%)
RICIN 488..607 CDD:238092 20/84 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3736
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D606683at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

Return to query results.
Submit another query.