DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgant1 and Galnt9

DIOPT Version :9

Sequence 1:NP_611043.1 Gene:Pgant1 / 36717 FlyBaseID:FBgn0034025 Length:601 Species:Drosophila melanogaster
Sequence 2:NP_001116116.1 Gene:Galnt9 / 304571 RGDID:1311523 Length:604 Species:Rattus norvegicus


Alignment Length:649 Identity:212/649 - (32%)
Similarity:317/649 - (48%) Gaps:125/649 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 LIIFILVALCFILYSKVQQNGSPEEPPVAPLVRAAALRGHGR-ERFEAYSDSE------------ 63
            :::|:.:.| |.:|.::|....    .:..:||.|..|...| .:..|.:|.|            
  Rat    15 ILVFVGIIL-FSVYCRLQDRSE----ALVQVVRGADRRMRNRLSKASALTDREAILQRLDHLEEV 74

  Fly    64 -----NEIARPATQSPYEQIIQLDLQKQKVGLGEQGVAVHLSGAAKERGDEIYKKIALNEELSEQ 123
                 |.:|:|           :.|.:...|||:.|||..|...::|...: ::....|.:||::
  Rat    75 VYNQLNGLAKP-----------IGLVEGPGGLGQGGVAATLQDDSQETEGK-FEDFGYNAQLSDR 127

  Fly   124 LTYNRSVGDHRNPLCAKQRFDSDSLPTASVVIIFFNEPYSVLLRTVHSTLSTCNEKALKEIILVD 188
            ::.:|::.|:|...| :|...|:.||..|||.||.||..||:||:|||.::....:.||||||||
  Rat   128 ISLDRTIPDYRPKRC-RQITYSEDLPQISVVFIFVNEALSVILRSVHSVVNHTPSQLLKEIILVD 191

  Fly   189 DGSDNVELGAKLDYYVRTRIPSGKVTILRLKNRLGLIRARLAGARIATGDVLIFLDAHCEGNIGW 253
            |.||||||...||.||..|.| |.|.::|...|.|||||||.|.::||..::.|.|||.|.|.||
  Rat   192 DNSDNVELKFNLDQYVHKRYP-GLVKVVRNSRREGLIRARLQGWKVATAPIVGFFDAHVEFNTGW 255

  Fly   254 CEPLLQRIKESRTSVLVPIIDVIDANDF---QYSTNGYKSFQVGGFQWNGHF--------DWINL 307
            .||.|.||:|.|..:::|.||.|..:.|   ||::..:      |:.| |.:        ||::.
  Rat   256 AEPALARIQEDRRRIILPAIDNIKYSTFEVQQYASAAH------GYNW-GLWCMYIIPPQDWLDR 313

  Fly   308 PEREKQRQRRECKQEREICPAYSPTMAGGLFAIDRRYFWEVGSYDEQMDGWGGENLEMSFRIWQC 372
            .:              |..|..:|.|.|..|.:||.||.::|..|..|:.:|.||:|:..|:|||
  Rat   314 GD--------------ESAPIRTPAMIGCSFVVDREYFGDIGLLDPGMEVYGAENIELGMRVWQC 364

  Fly   373 GGTIETIPCSRVGHIFRDFHPYKFPNDRDTHG-INTARMALVWMDEYINIFFL--NRPDLKFHAD 434
            ||::|.:|||||.||.|...||.  ||.|.:. .|..|.|.||||::.:..::  |.|......|
  Rat   365 GGSMEVLPCSRVAHIERTKKPYN--NDIDYYAKRNALRAAEVWMDDFKSHVYMAWNIPMTNPGVD 427

  Fly   435 IGDVTHRVMLRKKLRCKSFEWYLKNIYPEKFVPTKDVQGWGKV-HAVNSNICLDDLLQNNEKPYN 498
            .|||:.|:.||:||:|:||:|||:|:|||..:....:. :|:| ::..|..|||   |..|....
  Rat   428 FGDVSERLALRQKLKCRSFKWYLENVYPEMRIYNNTLT-YGEVRNSKASGYCLD---QGAEDDDR 488

  Fly   499 AGLYPCGKVLQKSQLFSFTNTNVLRNELSCATVQHSESPPYRVVMVP---CMEND---------- 550
            |.||||..:  .|||..::...:|:           ..|......:|   |:.:|          
  Rat   489 AILYPCHGM--SSQLVRYSADGLLQ-----------LGPLGSTAFLPDSKCLVDDGRGRMPTLKK 540

  Fly   551 ------EFNEQWRY-EHQHIIHSNTGMCLDHQGLKSLDDAQ------VAPCDPHSESQRWTIEH 601
                  .....|.: :...|:..:||.||:.:..|   ||.      |..|    ..|:|.|.:
  Rat   541 CEDVARPTQRLWDFTQSGPIVSRDTGRCLEVEMSK---DANFGLRLVVQRC----SGQKWMIRN 597

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant1NP_611043.1 WcaA 147..426 CDD:223539 122/292 (42%)
pp-GalNAc-T 152..461 CDD:133004 138/322 (43%)
Ricin_B_lectin 474..597 CDD:279046 33/149 (22%)
RICIN 481..599 CDD:238092 32/143 (22%)
Galnt9NP_001116116.1 pp-GalNAc-T 155..454 CDD:133004 138/322 (43%)
Ricin_B_lectin 465..593 CDD:279046 33/151 (22%)
RICIN 467..595 CDD:238092 34/150 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3736
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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