DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgant1 and Galnt18

DIOPT Version :9

Sequence 1:NP_611043.1 Gene:Pgant1 / 36717 FlyBaseID:FBgn0034025 Length:601 Species:Drosophila melanogaster
Sequence 2:NP_001073353.1 Gene:Galnt18 / 293181 RGDID:1309623 Length:607 Species:Rattus norvegicus


Alignment Length:644 Identity:192/644 - (29%)
Similarity:290/644 - (45%) Gaps:116/644 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 LVALCFIL------------------YSKVQQNGSPEEPPVAPLVRAAALRGHGRERFEAYSDSE 63
            ||:.|.||                  .:.|...|  :||  ||..:....:|...:..|.....|
  Rat    10 LVSTCVILSGMTNIICLLYVGWVTNYIASVYVRG--QEP--APDKKLEEDKGDTLKIIERLDHLE 70

  Fly    64 NEIARPATQSPYEQIIQLDLQKQKVGLGEQGVAVHLSGAAKERGDEIYKKIAL--------NEEL 120
            |.|.:...::|.:     ..:.:.....:..:..|........|    :::||        |..|
  Rat    71 NVIKQHIQEAPAK-----PEEAEAEPFTDSSLFAHWGQELSPEG----RRVALKQFQYYGYNAYL 126

  Fly   121 SEQLTYNRSVGDHRNPLCAKQRFDSDSLPTASVVIIFFNEPYSVLLRTVHSTLSTCNEKALKEII 185
            |::|..:|.:.|.|...|....| .||||..|:|.||.||..|||||::||.:.......|||||
  Rat   127 SDRLPLDRPLPDLRPSGCRNLSF-PDSLPEVSIVFIFVNEALSVLLRSIHSAMERTPSHLLKEII 190

  Fly   186 LVDDGSDNVELGAKLDYY---VRTRIPSGKVTILRLKNRLGLIRARLAGARIATGDVLIFLDAHC 247
            ||||.|.|.||..||..|   |..:.| |.:.::|...:.||||:|::|.|.||..|:...|||.
  Rat   191 LVDDNSSNEELKEKLTEYVDKVNGQKP-GFIKVVRHSKQEGLIRSRVSGWRAATAPVVALFDAHV 254

  Fly   248 EGNIGWCEPLLQRIKESRTSVLVPIIDVIDANDFQYSTNGYKSFQVGGFQWNGHFDWINLPEREK 312
            |.|:||.||:|.||||:|..::.|..|.|..::|:...   ......||.|.....::|.|    
  Rat   255 EFNVGWAEPVLTRIKENRKRIISPSFDNIKYDNFEIEE---YPLAAQGFDWELWCRYLNPP---- 312

  Fly   313 QRQRRECKQEREICPAYSPTMAGGLFAIDRRYFWEVGSYDEQMDGWGGENLEMSFRIWQCGGTIE 377
               :...|.|....|..||.:. |.|.:||:||.|:|..||.|:.:||||:|:..|:|||||::|
  Rat   313 ---KAWWKLENSTAPIRSPALI-GCFIVDRQYFEEIGLLDEGMEVYGGENVELGIRVWQCGGSVE 373

  Fly   378 TIPCSRVGHIFRDFHPYKFPNDRDTH-GINTARMALVWMDEYINIFFL--NRPDLKFHADIGDVT 439
            .:||||:.||.|...||  ..|...| ..|..|:|.|||||:.:..::  |.|......||||:|
  Rat   374 VLPCSRIAHIERAHKPY--TEDLTAHVRRNALRVAEVWMDEFKSHVYMAWNIPQEDSGIDIGDIT 436

  Fly   440 HRVMLRKKLRCKSFEWYLKNIYPEKFVPTKDVQGWGKV-HAVNSNICLDDLLQNNEKPYNAGLYP 503
            .|..|||:|:||:|.|||.::|||..: ..|:..:|.: :::.:::|.|........|.   :|.
  Rat   437 ARKALRKQLQCKTFRWYLVSVYPEMRM-YSDIIAYGVLQNSLKTDLCFDQGPDTENVPI---VYI 497

  Fly   504 CGKVLQKSQLFSFTNTNVLRNELSCATVQHSESPPYRV-VMVPCMENDE---------------- 551
            |                   :.::...|.::.|....| |:.|.:::|:                
  Rat   498 C-------------------HGMTPQNVYYTSSQQIHVGVLSPTIDDDDNRCLVDVNSRPRLIEC 543

  Fly   552 -------FNEQWRYEHQHIIHS-NTGMCLDHQGLKSLD---DAQVAPCDPHSESQRWTI 599
                   ....|::.....|.: .:..||:.|....::   ...:..|    ..|.|||
  Rat   544 SYAKAKRMKLHWQFSQGGSIQNRKSKRCLELQENSDMEFGFQLVLQKC----SGQHWTI 598

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant1NP_611043.1 WcaA 147..426 CDD:223539 117/284 (41%)
pp-GalNAc-T 152..461 CDD:133004 132/314 (42%)
Ricin_B_lectin 474..597 CDD:279046 19/151 (13%)
RICIN 481..599 CDD:238092 19/145 (13%)
Galnt18NP_001073353.1 pp-GalNAc-T 157..458 CDD:133004 132/314 (42%)
Ricin_B_lectin 469..596 CDD:279046 19/152 (13%)
RICIN 471..598 CDD:238092 20/152 (13%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3736
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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