DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgant1 and Galnt2

DIOPT Version :9

Sequence 1:NP_611043.1 Gene:Pgant1 / 36717 FlyBaseID:FBgn0034025 Length:601 Species:Drosophila melanogaster
Sequence 2:XP_038953584.1 Gene:Galnt2 / 292090 RGDID:1310692 Length:570 Species:Rattus norvegicus


Alignment Length:592 Identity:222/592 - (37%)
Similarity:309/592 - (52%) Gaps:43/592 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 LIIFILVALCFILYSKVQQNGSPEEPPVAPLVRAAALRGHGRERFEAYSDSENEIARPATQSPYE 76
            |:.|.|:.:..|.|......||           |.|..|.|..|...::|.::...:....|..:
  Rat     8 LLCFALLWVLGIAYYMYSGGGS-----------ALAAGGGGAGRKGDWNDIDSIKKKDLHHSRGD 61

  Fly    77 QIIQL--DLQKQKVGLGEQGVAVHLSGAAKERGDEIYKKIALNEELSEQLTYNRSVGDHRNPLCA 139
            :..|.  .|...||...:.....::.|.....|.:.|.:...|:..|::|..:||:.|.|:..|.
  Rat    62 EKAQSMETLPPGKVRWPDFNQEAYVGGTMVRSGQDPYARNKFNQVESDKLRMDRSIPDTRHDQCQ 126

  Fly   140 KQRFDSDSLPTASVVIIFFNEPYSVLLRTVHSTLSTCNEKALKEIILVDDGSDNVELGAKLDYYV 204
            ::::..| ||..||||.|.||..|.|||||.|.|.......:||||||||.|::.|.||.|.   
  Rat   127 RKQWRVD-LPATSVVITFHNEARSALLRTVVSVLKRSPPHLIKEIILVDDYSNDPEDGALLG--- 187

  Fly   205 RTRIPSGKVTILRLKNRLGLIRARLAGARIATGDVLIFLDAHCEGNIGWCEPLLQRIKESRTSVL 269
              :|.  ||.:||...|.||:|:|:.||..|...||.|||:|||.|..|.||||:|:.|.||.|:
  Rat   188 --KIE--KVRVLRNDRREGLMRSRVRGADAAQAKVLTFLDSHCECNERWLEPLLERVAEDRTRVV 248

  Fly   270 VPIIDVIDANDFQYSTNGYKSFQVGGFQWNGHFDWINL-PEREKQRQRRECKQEREICPAYSPTM 333
            .||||||:.::|||.  |..:...|||.||..|.|..: ||:.:.|      |...:.|..:|.:
  Rat   249 SPIIDVINMDNFQYV--GASADLKGGFDWNLVFKWDYMTPEQRRSR------QGNPVAPIKTPMI 305

  Fly   334 AGGLFAIDRRYFWEVGSYDEQMDGWGGENLEMSFRIWQCGGTIETIPCSRVGHIFRDFHPYKFPN 398
            |||||.:|:.||.|:|.||..||.|||||||:|||:|||||::|.||||||||:||..|||.||.
  Rat   306 AGGLFVMDKLYFEELGKYDMMMDVWGGENLEISFRVWQCGGSLEIIPCSRVGHVFRKQHPYTFPG 370

  Fly   399 DRDT-HGINTARMALVWMDEYINIFFLNRPDLKFHADIGDVTHRVMLRKKLRCKSFEWYLKNIYP 462
            ...| ...||.|.|.|||||:.:.::...|..: :...|::..|:.|||||.||.|:|||.|:||
  Rat   371 GSGTVFARNTRRAAEVWMDEFKHFYYAAVPSAR-NVPYGNIQSRLELRKKLGCKPFKWYLDNVYP 434

  Fly   463 EKFVPTKDVQGWGKVHAVNSNICLDDLLQNNEKPYNAGLYPCGKVLQKSQLFSFTNTNVLRNELS 527
            |..||......:|.:.  ....|||.|  .:......|:|.|... ..:|.::.|....:::...
  Rat   435 ELRVPDHQDIAFGALQ--QGTNCLDTL--GHFADGVVGIYECHNA-GGNQEWALTKEKSVKHMDL 494

  Fly   528 CATVQHSESPPYRVVMVPCMENDEFNEQWRY--EHQHIIHSNTGMCLDHQGLKSLDDAQVAPCDP 590
            |.||. ..||...:.:..|.|||. .::|..  .:..:.|..:.:|||.:..|| ....|..|.|
  Rat   495 CLTVV-DRSPGSLIRLQGCRENDS-RQKWEQIEGNSKLRHVGSNLCLDSRTAKS-GGLSVEVCGP 556

  Fly   591 HSESQRW 597
             :.||:|
  Rat   557 -ALSQQW 562

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant1NP_611043.1 WcaA 147..426 CDD:223539 140/280 (50%)
pp-GalNAc-T 152..461 CDD:133004 153/310 (49%)
Ricin_B_lectin 474..597 CDD:279046 31/124 (25%)
RICIN 481..599 CDD:238092 31/119 (26%)
Galnt2XP_038953584.1 pp-GalNAc-T 138..433 CDD:133004 153/310 (49%)
Ricin_B_lectin 445..562 CDD:395527 31/125 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3736
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D606683at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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