DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgant1 and Galnt17

DIOPT Version :10

Sequence 1:NP_611043.1 Gene:Pgant1 / 36717 FlyBaseID:FBgn0034025 Length:601 Species:Drosophila melanogaster
Sequence 2:NP_001020283.1 Gene:Galnt17 / 288611 RGDID:1563452 Length:598 Species:Rattus norvegicus


Alignment Length:641 Identity:212/641 - (33%)
Similarity:324/641 - (50%) Gaps:106/641 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 LIIFILVALC-FILY-SKVQQNGSPEEPPVAPLVRAAALRGHGRERFE-----AYSDSENEIARP 69
            |::..|:|:. |::: :|.:        |:|  ||:.......|.|.|     |:|.|..:.|..
  Rat    10 LLVLNLIAVAGFVIFLAKCR--------PIA--VRSGDAFHEIRPRAEVANLSAHSASPIQDAVL 64

  Fly    70 ATQSPYEQII--QLDLQKQKVGL-------GEQGVAVHLSGAAKERGDEIYKKIALNEELSEQLT 125
            ...|..|.|:  ||:...:.:||       |:.|:...||.:.:|:....::|...|..|||:::
  Rat    65 KRLSLLEDIVYRQLNGLSKSLGLIEGYGGRGKGGLPATLSPSEEEKAKGPHEKYGYNSYLSEKIS 129

  Fly   126 YNRSVGDHRNPLCAKQRFDSDSLPTASVVIIFFNEPYSVLLRTVHSTLSTCNEKALKEIILVDDG 190
            .:||:.|:|...|.:.:: |..||..|::.||.||..||:||:|||.::......|||||||||.
  Rat   130 LDRSIPDYRPTKCKELKY-SKELPQISIIFIFVNEALSVILRSVHSAVNHTPTHLLKEIILVDDN 193

  Fly   191 SDNVELGAKLDYYVRTRIPSGKVTILRLKNRLGLIRARLAGARIATGDVLIFLDAHCEGNIGWCE 255
            ||..||.|.|:.||..|.| |.|.::|.:.|.||||||:.|.::|||.|..|.|||.|...||.|
  Rat   194 SDEEELKAPLEEYVHKRYP-GLVKVVRNQKREGLIRARIEGWKVATGQVTGFFDAHVEFTAGWAE 257

  Fly   256 PLLQRIKESRTSVLVPIIDVIDANDFQY-----STNGYKSFQVGGFQWNGHFDWINLPEREKQRQ 315
            |:|.||:|:|..|::|.||.|..::|:.     |.:|| |:::.....:...||.:..:..    
  Rat   258 PVLSRIQENRKRVILPSIDNIKQDNFEVQRYENSAHGY-SWELWCMYISPPKDWWDAGDPS---- 317

  Fly   316 RRECKQEREICPAYSPTMAGGLFAIDRRYFWEVGSYDEQMDGWGGENLEMSFRIWQCGGTIETIP 380
                      .|..:|.|.|..|.::|::|.|:|..|..||.:||||:|:..::|.|||::|.:|
  Rat   318 ----------LPIRTPAMIGCSFVVNRKFFGEIGLLDPGMDVYGGENIELGIKVWLCGGSMEVLP 372

  Fly   381 CSRVGHIFRDFHPYK----FPNDRDTHGINTARMALVWMDEYINIFFL--NRPDLKFHADIGDVT 439
            ||||.||.|...||.    |...|     |..|:|.||||:|.:..::  |.|......|||||:
  Rat   373 CSRVAHIERKKKPYNSNIGFYTKR-----NALRVAEVWMDDYKSHVYIAWNLPLENPGIDIGDVS 432

  Fly   440 HRVMLRKKLRCKSFEWYLKNIYPEKFVPTKDVQGWGKVHAVNSNICLDDLLQNNEKP-------- 496
            .|..|||.|:||:|:|||.::|||             :...|:.|...:|..|..|.        
  Rat   433 ERKALRKSLKCKNFQWYLDHVYPE-------------MRRYNNTIAYGELRNNKAKDVCLDQGPL 484

  Fly   497 --YNAGLYPC---GKVLQKSQLFSFTN-----TNVLRNELSCATVQHSES--PPYRVVMVPCME- 548
              :.|.||||   |..|.:.....|.:     |..|..:..| .|.:|:|  |.    ::.|.: 
  Rat   485 ENHTAILYPCHGWGPQLARYTKEGFLHLGALGTTTLLPDTRC-LVDNSKSRLPQ----LLDCDKV 544

  Fly   549 NDEFNEQWRY-EHQHIIHSNTGMCL--DHQGLKSLDDAQVAPCDPHSESQRWTIEH 601
            .....::|.: ::..|::..||.||  :::||..: |..:..|    ..|||||::
  Rat   545 KSSLYKRWNFIQNGAIMNKGTGRCLEVENRGLAGI-DLILRSC----TGQRWTIKN 595

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant1NP_611043.1 pp-GalNAc-T 152..461 CDD:133004 132/319 (41%)
beta-trefoil_Ricin_Pgant1-like 468..601 CDD:467337 36/156 (23%)
Galnt17NP_001020283.1 pp-GalNAc-T 155..454 CDD:133004 132/319 (41%)
beta-trefoil_Ricin_GALNT17 457..598 CDD:467352 36/149 (24%)

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