DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pgant1 and Galnt13

DIOPT Version :9

Sequence 1:NP_611043.1 Gene:Pgant1 / 36717 FlyBaseID:FBgn0034025 Length:601 Species:Drosophila melanogaster
Sequence 2:XP_036018146.1 Gene:Galnt13 / 271786 MGIID:2139447 Length:613 Species:Mus musculus


Alignment Length:650 Identity:231/650 - (35%)
Similarity:330/650 - (50%) Gaps:112/650 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 RSFYGKLII-----FILVALCFILY-SKVQQNGSPEEPPVAPLVRAAALRGHGRERFEAYSDSEN 64
            |..|.|:::     ::||.:..:|| |:..:....:|..:.|.:||.                  
Mouse     3 RFVYCKVVLATSLMWVLVDVFLLLYFSECNKCDDKKERSLLPALRAV------------------ 49

  Fly    65 EIARPATQSPYEQIIQLDLQKQKVGLGEQGVAVHLSGAAKERGDEIYKKIALNEELSEQLTYNRS 129
                              :.:.:.|.||.|.||.:....:|:..|::|....|...|:.:..|||
Mouse    50 ------------------ISRNQEGPGEMGKAVLIPKDDQEKMKELFKINQFNLMASDLIALNRS 96

  Fly   130 VGDHR-----------------------------------------NPLCAKQRFDSDSLPTASV 153
            :.|.|                                         ..|..|.:...|.||..||
Mouse    97 LPDVRLEGQYCCGRCEELQTMQQERYARVYISTNFCSSILFWLKCNTELRCKTKVYPDELPNTSV 161

  Fly   154 VIIFFNEPYSVLLRTVHSTLSTCNEKALKEIILVDDGSDNVELGAKLDYYVRT-RIPSGKVTILR 217
            ||:|.||.:|.|||||:|.::......|.|:|||||.|:...|...|:.||:| .:|   |.|:|
Mouse   162 VIVFHNEAWSTLLRTVYSVINRSPHYLLSEVILVDDASERDFLKLTLENYVKTLEVP---VKIIR 223

  Fly   218 LKNRLGLIRARLAGARIATGDVLIFLDAHCEGNIGWCEPLLQRIKESRTSVLVPIIDVIDANDFQ 282
            ::.|.|||||||.||..:.|.|:.|||||||..:||.||||.||||.|.:|:.||||||..:.|:
Mouse   224 MEERSGLIRARLRGAAASKGQVITFLDAHCECTLGWLEPLLARIKEDRKTVVCPIIDVISDDTFE 288

  Fly   283 YSTNGYKSFQVGGFQWNGHFDWINLPEREKQRQRRECKQEREICPAYSPTMAGGLFAIDRRYFWE 347
            |......::  |||.|..:|.|..:|:||..|:    |.:|.: |..:||||||||:|||.||.|
Mouse   289 YMAGSDMTY--GGFNWKLNFRWYPVPQREMDRR----KGDRTL-PVRTPTMAGGLFSIDRNYFEE 346

  Fly   348 VGSYDEQMDGWGGENLEMSFRIWQCGGTIETIPCSRVGHIFRDFHPYKFPNDRDTHGI--NTARM 410
            :|:||..||.|||||||||||||||||::|.:.||.|||:||...||.||.... |.|  |..|:
Mouse   347 IGTYDAGMDIWGGENLEMSFRIWQCGGSLEIVTCSHVGHVFRKATPYTFPGGTG-HVINKNNRRL 410

  Fly   411 ALVWMDEYINIFFLNRPDLKFHADIGDVTHRVMLRKKLRCKSFEWYLKNIYPEKFVPTKDVQGWG 475
            |.|||||:.:.|::..|.: ...|.|||:.|..||:.|:||.|.|||:||||:..:|.: ....|
Mouse   411 AEVWMDEFKDFFYIISPGV-VKVDYGDVSVRKTLRENLKCKPFSWYLENIYPDSQIPRR-YYSLG 473

  Fly   476 KVHAVNSNICLDDL-LQNNEKPYNAGLYPCGKVLQKSQLFSFTNTNVLRNELSCATVQHSESPPY 539
            ::..|.:|.|||:: .:.|||   .|::.| ..:..:|:||:|....:|.:..|..|.....|  
Mouse   474 EIRNVETNQCLDNMGRKENEK---VGIFNC-HGMGGNQVFSYTADKEIRTDDLCLDVSRLSGP-- 532

  Fly   540 RVVMVPCMENDEFNEQWRY--EHQHIIHSNTGMCLD-HQGLKSLDDAQVAPCDPHSESQRWTIEH 601
             |:|:.| .:...|:.|.|  |...::|..|..||. .:|.....|..:..|: .|..|:|.:.:
Mouse   533 -VIMLKC-HHMRGNQLWEYDAETHTLVHIITQSCLSMGKGEDGSQDLSMETCN-DSTFQKWLLRN 594

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant1NP_611043.1 WcaA 147..426 CDD:223539 144/281 (51%)
pp-GalNAc-T 152..461 CDD:133004 158/311 (51%)
Ricin_B_lectin 474..597 CDD:279046 35/126 (28%)
RICIN 481..599 CDD:238092 34/121 (28%)
Galnt13XP_036018146.1 pp-GalNAc-T 160..460 CDD:133004 158/311 (51%)
Ricin_B_lectin 473..590 CDD:395527 35/125 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3736
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D606683at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11675
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.920

Return to query results.
Submit another query.