DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgant1 and Pgant4

DIOPT Version :9

Sequence 1:NP_611043.1 Gene:Pgant1 / 36717 FlyBaseID:FBgn0034025 Length:601 Species:Drosophila melanogaster
Sequence 2:NP_001137779.1 Gene:Pgant4 / 261610 FlyBaseID:FBgn0051956 Length:644 Species:Drosophila melanogaster


Alignment Length:632 Identity:196/632 - (31%)
Similarity:309/632 - (48%) Gaps:70/632 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 LIIFILVALCFILY--------SKVQQNGSPEEPPVAPLVRAAALRGHGRERFEAYSDSENEIAR 68
            |::.:.|:|...|.        :::.:...|...|:.|:.|||.:....:.....:.|..:.:..
  Fly    19 LVVIVTVSLVTTLVVERRMKNAAELTEQLDPNGDPITPVFRAANIHPTRKAPRPPFQDRNSVVDI 83

  Fly    69 PAT--------------QSPYEQIIQLDLQKQKVGLGEQGVAVHLSGA-AKERGDEIYKKIALNE 118
            |.:              :..:.....::..:::.|.||.||||.:... .|:...|.|:....|.
  Fly    84 PRSDKLQGFRLPEPKGERKDWHDYAAMEADRKRSGFGEHGVAVKIENPDEKQLEKEHYEMNGFNG 148

  Fly   119 ELSEQLTYNRSVGDHRNPLCAKQRFDSDSLPTASVVIIFFNEPYSVLLRTVHSTLSTCNEKALKE 183
            .:|::::.||||.|.|...|..:::.: .||..||:.|||||.::.|||:::|.::....:.||:
  Fly   149 LISDRISVNRSVPDLRLEACKTRKYLA-KLPNISVIFIFFNEHFNTLLRSIYSVINRTPPELLKQ 212

  Fly   184 IILVDDGSDNVELGAKLDYYVRTRIPSGKVTILRLKNRLGLIRARLAGARIATGDVLIFLDAHCE 248
            |:||||||:...|...||.||:...|. .|||:|...|.|||.||:|||::|.|.|::|.|:|.|
  Fly   213 IVLVDDGSEWDVLKQPLDDYVQQHFPH-LVTIVRNPERQGLIGARIAGAKVAVGQVMVFFDSHIE 276

  Fly   249 GNIGWCEPLLQRIKESRTSVLVPIIDVIDANDFQYSTNGYKSFQVGGFQWNGHFDWIN-LPEREK 312
            .|..|..||::.|..:......|::|.|...||.| .:|.|....|||.|...:..:. |||...
  Fly   277 VNYNWLPPLIEPIAINPKISTCPMVDTISHEDFSY-FSGNKDGARGGFDWKMLYKQLPVLPEDAL 340

  Fly   313 QRQRRECKQEREICPAYSPTMAGGLFAIDRRYFWEVGSYDEQMDGWGGENLEMSFRIWQCGGTIE 377
            .:.          .|..||.|.||||||:..:||::|.||:|:|.||||..|:||:||.|||.:.
  Fly   341 DKS----------MPYRSPVMMGGLFAINTDFFWDLGGYDDQLDIWGGEQYELSFKIWMCGGMLL 395

  Fly   378 TIPCSRVGHIFR-DFHPYKFPNDRDTHGINTARMALVWMDEYINIFFLNRPDLKFHADIGDVTHR 441
            .:|||||.|||| ...|...|...:....|..|:|.||||||....:...|....:.|.||:|.:
  Fly   396 DVPCSRVAHIFRGPMKPRGNPRGHNFVAKNHKRVAEVWMDEYKQYVYKRDPKTYDNLDAGDLTRQ 460

  Fly   442 VMLRKKLRCKSFEWYLKNIYPE---KFVPTKD-------VQGWGKVHAVNSNICLDDLLQNNEKP 496
            ..:|::|:||||.|::..:.|:   ||.|.:.       :|     :..|...|||::.::.|:.
  Fly   461 RGVRERLKCKSFHWFMTEVAPDFLVKFPPVEPPSYAAGIIQ-----NVANPVYCLDNMGKSTEEA 520

  Fly   497 YNAGLYPCGKVLQKSQLFSFTNTNVLRN------ELSCATVQHSESPPYRVVMVPCMENDEFNEQ 555
              .|::.|.......|...|...::.|:      :..|..|.  |.||...|.:....:...|:.
  Fly   521 --VGMFSCADNRTHPQPNQFWELSIFRDLRMKGFDSVCLDVH--EGPPNATVWMWSCHSQGGNQF 581

  Fly   556 WRYEH--QHIIH-SNTGMCLDHQGLKSLDDAQVA--PCDPHSESQRW 597
            |.|:.  |.::| .|...||  :|......|:|.  .|:..::.|||
  Fly   582 WYYDRQTQRLVHGENNKRCL--EGFVENGIAKVVANSCENGNDRQRW 626

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant1NP_611043.1 WcaA 147..426 CDD:223539 117/280 (42%)
pp-GalNAc-T 152..461 CDD:133004 127/310 (41%)
Ricin_B_lectin 474..597 CDD:279046 29/133 (22%)
RICIN 481..599 CDD:238092 31/128 (24%)
Pgant4NP_001137779.1 BcsA 169..>403 CDD:224136 101/246 (41%)
pp-GalNAc-T 181..480 CDD:133004 127/310 (41%)
Ricin_B_lectin 496..626 CDD:279046 30/140 (21%)
RICIN 498..628 CDD:238092 32/140 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3736
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D60373at6656
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11675
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.920

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